Gene CPR_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1603 
SymbolrbsK 
ID4205411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1794221 
End bp1795153 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content29% 
IMG OID642566154 
Productribokinase 
Protein accessionYP_698919 
Protein GI110802146 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.77641e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA TATGTGTACT TGGAAGTATG AATATGGATT TAGTTTTAAA GGTTAAAGAT 
ATGCCTAAAG TAGGAGAAAC TATACTTTCT AAGTCATTTC AAAAAATAGC TGGTGGAAAA
GGAGCTAATC AAGCAGTAGC AGCTAAAAGA AGTGGTGCAG AAGTTTTCAT GATTTCTAAA
ATAGGAAAAG ATGAAAATGG AAGAGAGTTA AGAGATAAAT TGGTAGAAGA TAATATAGAT
GTTAAGTATG TTTTTGAAGA TAGAATAGAG CCAACTGGAA TGGCTTTAAT AATGGTAAAT
GATAATGGAA ATAATTCAAT AATTGTTAAT GCTGGTTCAA ATATGACATT AACAAAAGAT
GAAATACATA GTGCTGAAAA TTTAATAAAA GAATCAGATA TTATAATTTC ACAATTTGAA
ACACCAGAGG ATATTACAAT AGAAGCATTT AAAATAGCTA AGGAAAATGG AAAAGTTACA
ATATTAAATC CAGCTCCAGC TAAAAAAATA AAAGATCAAT TATTAAAATA TACAGATATA
ATAGTTCCAA ATGAAACAGA AGCAGAGCTT TTAACTGGAA TTGAAATAAA AGATATAGAA
GATGCTAAAA AGGCTGGGGA TATATTTTTA GATAAAGGAG TTAAGTTTAT AATTATTACT
CTTGGTGAAA AGGGAGCAGC TTTAATAGGA AAAGATTTTT GTGAAATAGT TCTAGCGTAT
AGAGTTAATG CAATAGATAC TACAGCTGCT GGAGATAGCT TCATTGGAGG CTTAAGTTCA
AAGTTAGATA CTAAAAATTT AGGAAGAGAG ACTTTAAGTA GCTCCATAAG ATTTGGAAAT
AAGGTATCAT CAATAGCAGT ACAAAGAAAA GGAGCTCAAC CATCAATACC ATATTTACAT
GAAGTTTTAG AAGTTTATAA GGGAGAAGAG TAA
 
Protein sequence
MNKICVLGSM NMDLVLKVKD MPKVGETILS KSFQKIAGGK GANQAVAAKR SGAEVFMISK 
IGKDENGREL RDKLVEDNID VKYVFEDRIE PTGMALIMVN DNGNNSIIVN AGSNMTLTKD
EIHSAENLIK ESDIIISQFE TPEDITIEAF KIAKENGKVT ILNPAPAKKI KDQLLKYTDI
IVPNETEAEL LTGIEIKDIE DAKKAGDIFL DKGVKFIIIT LGEKGAALIG KDFCEIVLAY
RVNAIDTTAA GDSFIGGLSS KLDTKNLGRE TLSSSIRFGN KVSSIAVQRK GAQPSIPYLH
EVLEVYKGEE