Gene CPR_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1585 
Symbol 
ID4205489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp1774053 
End bp1774706 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content26% 
IMG OID642566136 
Producthypothetical protein 
Protein accessionYP_698901 
Protein GI110802204 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0628648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAT TTTATAAATT TTTAATTTCT ATAATAATAT TAGTTTTAGT TTGTCTTATA 
TTTTTCCTTG CTAAGAGTAA TATATTAAAT TTAGATAGAT TAAAAAACTT AATTTTAAGT 
TCTGGATATT TTGCTCCACT AATTTATATA ATAGCCTTTT CCTTAGTTCC ATTAACTTTT 
TTCCCAGATT CAGTATTAGC AATCTTAGGT GGAAGTATAT TTGGACTAGG CGGAGGATTC 
TTATATACAA GTATTGGTGC TTTAATAGGT GGAAGTATAT CTTTCTTTAT TTCTCGAATC 
CTTGGTCAAT CCTTTGTAGA AAAGTTTGAA AATGATAAAA TTAAAAATAT ACAAGAATTA 
TTAAAGGACA ATGGATTTTT AATGATTCTA CTTTTAAGAT TAATACCGCT CTTCCCCTTT 
GACTTAATAA GCTATGGAGC TGGTCTTACT AAAATATCAT ATAAAGACTT TGCTTTAGGT 
ACTTTAATAG GAACTATTCC TGGCATATTA GTTTTTGTAA ATTTGGGAGC TCAATGGATT 
ACTTTTAACA AAACAAGTAT ATATCTATCT GTAAGTCTAT TAATATTATT CATAATATTA 
TCTGTGTTCT TAAAGAAAAT TTATATAAAT AAGCATTTAG AAAAAGGCAA TTAA
 
Protein sequence
MTKFYKFLIS IIILVLVCLI FFLAKSNILN LDRLKNLILS SGYFAPLIYI IAFSLVPLTF 
FPDSVLAILG GSIFGLGGGF LYTSIGALIG GSISFFISRI LGQSFVEKFE NDKIKNIQEL 
LKDNGFLMIL LLRLIPLFPF DLISYGAGLT KISYKDFALG TLIGTIPGIL VFVNLGAQWI 
TFNKTSIYLS VSLLILFIIL SVFLKKIYIN KHLEKGN