| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1583 |
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| Symbol | |
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| ID | 4206441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1771917 |
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| End bp | 1773071 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566134 |
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| Product | ISCpe2, transposase orfB |
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| Protein accession | YP_698899 |
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| Protein GI | 110802662 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0166589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATATCCAA CTAAGAAACA AGCGGAGCTA
ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA
ACTAAAGATA ATTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGCTA CTTCCAAGAG
AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCTAAATTA
AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGC TTCTGTTGAA
AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAAAAG GTGGCAGACC TAAATTTAAG
TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTAG TAAAAGCTAA GGGTAATGTA
AATATTGAAA TAGTAGGTAA AGGAATTAAA CTACCTAAAC TTGGATTAAT TAAGATAGAA
AATTCAAGAA ATATAGATGG AAATATTAAA AGAGTTACTG TGAACAGAAC ACAATCTGGT
AAATATTTTG CATCCATTCT TTGTGATGTA AATATTCAAG AATTACCTAA AATAGATAAA
AAAGTTGGTG TAGATGTTGG ACTTAAAACT TTTGCTGTTT GTTCTGATGG ATATGAAGAA
GCTAATCCTA AACACTTTAG AAAGGCAGAA AAAAGACTTA TTAAACTTCA AAGAGATTTA
GCTCGTAAAG AATATAATTC TAAAAACTAT CACAAAAATA GAATTATGAT TGCTAAATTA
CATGAAAGGA TAGCAAATCA AAGAATGGAC TTCTTACAAA AATTTTCAAC TAAGCTAATT
AGAGAAAACC AATCAATAGC CATTGAAGAT TTAAGAGTTT CAAATATGCT TAAAAACCAC
AAACTTGCTA AAATAATTTC AGAAGCAAGT TGGTCAGAAT TTAGAAGAAT GCTAGAATAC
AAGGCTGAAT GGTATGGTAG AAAAATAGTA ATTGCTCCAC CAGACTATGC AAGCTCTCAA
CTATGTTCCG AATGTGGTTA TAAGAATACA GAAGTTAAAA ACCTAGGTCT AAGAGAATGG
GTATGTCCCG AATGTGGAAC ACACCATCAA AGAGACCTTA ATGCTTCAAT AAACTTGGAA
AAGCTGATAG CTTAA
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| Protein sequence | MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDNYWNIVE EMVQQGYFQE
NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQASVE NLGAGYDKYY KKKGGRPKFK
SKKNEIQSYT TKLVKAKGNV NIEIVGKGIK LPKLGLIKIE NSRNIDGNIK RVTVNRTQSG
KYFASILCDV NIQELPKIDK KVGVDVGLKT FAVCSDGYEE ANPKHFRKAE KRLIKLQRDL
ARKEYNSKNY HKNRIMIAKL HERIANQRMD FLQKFSTKLI RENQSIAIED LRVSNMLKNH
KLAKIISEAS WSEFRRMLEY KAEWYGRKIV IAPPDYASSQ LCSECGYKNT EVKNLGLREW
VCPECGTHHQ RDLNASINLE KLIA
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