Gene CPR_1577 details

Gene Information

• Locus tag: CPR_1577
• Symbol: msrB
• ID: 4205120
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1767755
• End bp: 1768198
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 642566128
• Product: methionine sulfoxide reductase B
• Protein accession: YP_698893
• Protein GI: 110803097
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00357] methionine-R-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000632227
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAATATA AAAAGAAGGA AAAAGAGGAA TTAAAAAAAA TCTTAACTGA GGAAGAATAT 
TATGTTACTC AAGAAAATGG AACTGAAAGA CCTTTTACAA ATGAATATTG GGACTTTAAT 
GGAGAAGGAA TATATGTAGA TATAACTACT GGAGAGCCTT TATTTACTTC AAAGGATAAA 
TTTCACTCTT CTTGTGGATG GCCTGCCTTT TCAAAACCAA TAGATAGGAG CATAATAAAA 
GAAAAGGTAG ATAAAAGTCA TGGAATGGTT AGAACGGAAG TTAGAAGTAA ACTAGGAGAT 
TCACATTTAG GCCATGTGTT TTGTGATGGA CCAGAGGAAT TAGGTGGATT AAGATATTGC 
ATAAATTCTG CTTCTTTAAA ATTTATTCCG AAGGAAGAAC TAAAGGAAAA GGGATATGAA 
GAATATTTAG AGCTCTTTAA ATAG 

 

Protein sequence

MKYKKKEKEE LKKILTEEEY YVTQENGTER PFTNEYWDFN GEGIYVDITT GEPLFTSKDK 
FHSSCGWPAF SKPIDRSIIK EKVDKSHGMV RTEVRSKLGD SHLGHVFCDG PEELGGLRYC 
INSASLKFIP KEELKEKGYE EYLELFK