Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1527 |
Symbol | |
ID | 4204760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1714471 |
End bp | 1715421 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642566080 |
Product | hypothetical protein |
Protein accession | YP_698845 |
Protein GI | 110802471 |
COG category | [S] Function unknown |
COG ID | [COG4129] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.210442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTTA TAGGTGTTAG AACTTGGAAA ACAGGAATAG GCGCTGTAAT AGCTATGATA ATAGCAAAGG AATTAGGGCT AAGTTACTGG GTTTCAGCAG GAATTATAAC CATACTTAGC ATACAGAGTA CAAAAAGAGA ATCATTAAAG ATAGCTATAA AGAGAATAGA ATCTGTTATT ATAGCCTTAA TAGTGTCTTC AGTTTTATTC TTAGCATTAG GGTTTAACTC AGTTGTTTTT GGATTATATA TTTTAGTTTT TATACCTTTA ACAGTAAAAC TAAAAGTGAC GGATGGAATT GTTGTAAGTT CTGTTTTAGT AACTCATTTA TTAGTTGAGA AACAGGTGAA TTCATATTGG ATAATAAATG AACTAGGTCT TATGCTAGTT GGGGTTTTAG TTGCATTAAT ATTAAATAGT TATATGCCTA AGAATGAGGA AAAGATAAAA GAAGACATAG ATTATATATC TGAAAAAATA AAAGAGATAT TTATGGACAT GGCATATTCT TTAAGAACAC ATAGTGTTTC AATAAAGGAA CAAAGACTTT TTGATGAACT TGAAAATAGA ATAGAGTTAG CTAAAAAAAG AGCTAATGAT AATTTTAATA ATTATTTGTT TTCAGATGTT AAGTACTATG TGCATTATAT AGATATGAGA GAAGTTCAAT TTCAAATTTT AAAGTACATG AGAGAACACT TTTCTAGAAT ATCTATTACT GTAAAACAGA CTGAACTAGT TGCTAATTTT ACAGAAGAAG TAGCCTCTGT AATAGGTAAA GAAGTTAACG TAAATATTCT TATAAATAGA TTAAATAGAT TGAAAAAAGA GTTAAGTGAA CAAGAACTTC CAGTAACCAG AGAAGAATTT GAAAATAGAG CTATGTTATT TCAATTTATT AATGATTTAG AGATTTTTAT AAAAACCAAA AATCAATGTT ATATAAAATA A
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Protein sequence | MRFIGVRTWK TGIGAVIAMI IAKELGLSYW VSAGIITILS IQSTKRESLK IAIKRIESVI IALIVSSVLF LALGFNSVVF GLYILVFIPL TVKLKVTDGI VVSSVLVTHL LVEKQVNSYW IINELGLMLV GVLVALILNS YMPKNEEKIK EDIDYISEKI KEIFMDMAYS LRTHSVSIKE QRLFDELENR IELAKKRAND NFNNYLFSDV KYYVHYIDMR EVQFQILKYM REHFSRISIT VKQTELVANF TEEVASVIGK EVNVNILINR LNRLKKELSE QELPVTREEF ENRAMLFQFI NDLEIFIKTK NQCYIK
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