Gene CPR_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1515 
Symbol 
ID4205244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1695880 
End bp1696434 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content29% 
IMG OID642566068 
ProductbioY family protein 
Protein accessionYP_698833 
Protein GI110803044 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00248245 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGA AAACAAGAGA TTTAACACTG ATACCTATTT TTGCAGCGCT TACAGCTATT 
GGGGCTTTCA TTAAGATACC AATACCAATA GTGCCTTTTA CACTTCAATA TTTCTTTTGT
GCCTTAGGAG CAATTTTACT TGGTGCTAAA AGAGGAGCCT TAGCTCAAAT AATCTATGTA
TTAGTTGGGC TTCTTGGAAT TCCTGTATTT ACTCAAGGAG GAGGACCATC ATATGTATTT
CAACCTACTT TTGGATATTT AATTGGTTTT ATTTTTGGAG CTTATATAAT TGGAAAAATA
ACAGAAAATC TAAAAAGTAT AAATATTAAA AATTTATTTT TAGTTGGAAT TTTAGGACTT
TTAGTAATCT ATTTATTTGG AGTTTCATAT ATGTATGTAA TTTATAATTT TTATATAGGG
GATGCAATGA GCTTATTATC AGCAGTGAGT ATTGGAGCCA TAGCATGTTT ACCAAGTGAT
TTATTATTGA CATTTATAAT TTCATTAGTA GGATCTAAGG TTTGCACAAG GTTAAAAATA
CTTGATTATA TTTAA
 
Protein sequence
MEMKTRDLTL IPIFAALTAI GAFIKIPIPI VPFTLQYFFC ALGAILLGAK RGALAQIIYV 
LVGLLGIPVF TQGGGPSYVF QPTFGYLIGF IFGAYIIGKI TENLKSINIK NLFLVGILGL
LVIYLFGVSY MYVIYNFYIG DAMSLLSAVS IGAIACLPSD LLLTFIISLV GSKVCTRLKI
LDYI