Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1508 |
Symbol | |
ID | 4205141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1687527 |
End bp | 1688864 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642566061 |
Product | putative lipoprotein |
Protein accession | YP_698826 |
Protein GI | 110803214 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00254139 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TTTTTACAAC TTCACTCTTA ATTCTTTCAA TGATTTTTCT AATAGGATGT GGATCTAAAA GTGAAAGTAA AAACTTTGGG CTATCTGTAT TTGGATTAGA AAAGTTTTCT GGATTAGATA AACCTGAAGA TAATATTAAA ATAAATTTAA ATGGTAAAAT TCAAGACTTA AGCTTACCAA TATACTTAGA TAAAAATAGA TATCTAATCC CTATAAGCGA AATAATCAAA AATAACAATG GGAAGTTTAA AATAGAGGAT GATTCTTTAA ATATTAAATT TGAAAATAAA GATATTAAAG TTAATTTAAA AGATAATACT TGGACTAATT TATCAAAGGA AGAATCAGAG GCTAATAAGT TTAAAATTGA TCCTATAGTA AAAGATGATA CTGTATATAT GTCTTTAATT GACTTTGTTA ATATATTTGA TTTAAAAAGC AGATGGAACT CAAAGGACAA GCTAATAAAA TTATATAATA ATAAAGATAT GTTAGATGTC AAACCTTATA AGGGAAAAGG CTCTCAAAAA GGAATAATAA GATTTGAAGA TGTTGCATCT ACTGGTACTG GAACAGAATA TGATTCACAA TATCTTGAAA CTATAAGAGT TATGGGAAGA TATTTAGATA AAAAAAATGT ACCTTACCAT ATAGCTTGGA TACCTAGGTA TATAGATCCT GAAAAAAAAA TAGACAATGA CCCTTCTAAA GAAAATAACT TTGCTAATGC TGAGCTTGTA TACACTTTAG ACTTTGTAGC TTCTCATAAA GGGGAAATAG GCTTACACGG ATATACTCAT CAAATAGGTA ATACAATTAG TGGCCATGGC TTTGAATTTG GAAAATACAA TCCATCTGTG GAGGATTTAA AGTCAAGAGT TTCTAAAGCT CTTCAAATAG CTAAAGATCT TGATATAAAA ATAAATTTCT TTGAAGCTCC TCATTACACT ATAAATAAAG CTCAAAATGA AGCTTTAGAA AAGAATTTTA AATATATATT TAATGATTAT GATGAAAATA AAGCACAATC AAAACCTATG AAATCACCAA CCGGAAGTGG TTCTTATTAT GTACCTACAC CTCTATATTA TATTGAGGGC GGTAAAGAAA ATGATATGTT AAATAAGATA AAAAACATGT CTAATACTAC TTTTGCTGGA ATGTTTTATC ATCCATTTTT AGAAGCTAAA CTAATAGATT TTAAAGATGG ACAAGATGGT TATCCTGAAG ATAATTATAA AAAACCATCT ATAATCCAAA AAGTAATTGA TGAATTTGAA AAAAGAAATG TATCTATTAT TTCAATAGAA CAAGTTTCTG AAAAATAA
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Protein sequence | MKKLFTTSLL ILSMIFLIGC GSKSESKNFG LSVFGLEKFS GLDKPEDNIK INLNGKIQDL SLPIYLDKNR YLIPISEIIK NNNGKFKIED DSLNIKFENK DIKVNLKDNT WTNLSKEESE ANKFKIDPIV KDDTVYMSLI DFVNIFDLKS RWNSKDKLIK LYNNKDMLDV KPYKGKGSQK GIIRFEDVAS TGTGTEYDSQ YLETIRVMGR YLDKKNVPYH IAWIPRYIDP EKKIDNDPSK ENNFANAELV YTLDFVASHK GEIGLHGYTH QIGNTISGHG FEFGKYNPSV EDLKSRVSKA LQIAKDLDIK INFFEAPHYT INKAQNEALE KNFKYIFNDY DENKAQSKPM KSPTGSGSYY VPTPLYYIEG GKENDMLNKI KNMSNTTFAG MFYHPFLEAK LIDFKDGQDG YPEDNYKKPS IIQKVIDEFE KRNVSIISIE QVSEK
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