Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1449 |
Symbol | |
ID | 4204342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1630758 |
End bp | 1632689 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566003 |
Product | ABC transporter |
Protein accession | YP_698768 |
Protein GI | 110801668 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.174197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATTT TAAGCTGTAG ACACTTAACT AAAAGTTTTG GTATTGATGA GATTTTAAGA GATGTAACAT TTAATATAAA TGAAGGTGAC AAGGTTGGTT TAATAGGACC AAATGGAGAA GGTAAATCAA CCTTATTTAA AATTCTTACC AAGCAACTAG ATTATGATAG TGGTGAATTA TTTTTAGATA AAAACAAAAC CCTAGGATAT CTCTCTCAGA ATTTATCTTT AGATAGTGAA AATACTATTT ATGATGAGAT GCTTTCTGTA TTCTCATCTT TAACGGAACT TGAAGATAAA ATTAAAACCT TAGAAGAAAA ACTTAATGAA CCTTATGATG CTTCAAAGGA AGAATATCAT AATAAACTTA TAAAGGATTA TACCTTATCT CAAGAACTTT ATGAAAATAG AGGAGGTTAT ACTTTTAGAG GAGAAATTTC TAGAGTTCTT AAAGGCTTAG GTTTTTTAGA GGAAGATTTC AACAATCAAA TTATAAACCT TAGTGGAGGT CAAAAAACTA GATTAGCACT CTGTAAACTA CTTTTAAGAA AACCAGACTT ACTTCTTTTA GATGAGCCTA CAAACCACTT AGATTTAGAA GCTATAGAAT GGCTTGAAGA ATATCTTAAT GGTTATAAGG GAACGGTTTT TGTTATTTCC CATGATAGAT TTTTCTTAGA CTCTGTAACA AATACAACCT TTGAACTTAT TGGTGGAAAG ATACATTGTT ATAATGCAAG CTATACTAAA TTCCTTGAAC TTAGAAAAAA GGATATTGAA GCTAGATTAA AAGCTTATAA TCTTCAACAG GCAGAAATAA AAAGACAAGA GGAAATTATA GAAAAGTTCC GTTCATTTAA TAGAGAAAAA AGTGTTAGAG CTGCTGAAAG TAGACAAAAA GCTTTAGATA AAATGGATCG TCTAGAGGCA CCAGAGGTTA TAAAAGAGGC TTCTAAAATA AGCTTTGAAA CCTTAGTTAA AAGTGGAAAT GATGTTTTAC ATATTGAAAA CCTAAAAAAG AGCTATGATA GTCTTTTATT TGAAAATGTA AATTTAGATT TAAAACGTGG AGAAAAGGTT GCCCTAATAG GGGAAAATGG TAGAGGTAAG ACTACTCTAT TTAAAATAAT AATGGGAATG TTAAAACAGG ATTCTGGTTC TGTATCCCTT GGTAAAAACG TATTTACAGG ATATTATGAC CAAGAACAAT CTAATTTAAA TCTCCATAAA ACCATAATAG ATGAAGTTTG GGATGACTTC CCTAATCTTA CTACTACTGA GATTAGAAAT TATCTTGCTT CTTTCTTATT TACTGGTGAT GATGTATTTA AAGAAATTTC CCTATTAAGT GGTGGTGAAA AGTGTAAGAT AAATCTTTTA AAACTTATGC TTTCAAAGGC CAATCTTCTT CTTTTAGATG AGCCTACAAA TCACTTAGAT ATTATGTCTA GAGAAGCCTT AGAAGATGCT ATTTTAAGTT ATGATGGAAC TTTAATAGTA ATCTCCCATG ATAGATACTT TTTAAATAAA GTAATTAACA AAATTGTTGA ACTTCAAGAA AATGGTCTTA AAACATACTT AGGAAATTAC AACTATTATA TGGATAAGAA AGCTAATCCT AATAGATATG AAGATATTGA TGAGGAAATA AACCAAGGAA AAACAAAAAC TCAAATAAAA GAAGAAAGAA AAAAGAAAAA ATCTGCTGAA AAATCAGCTA GAGCTTTAAG AGCTCAACTT AGAGATGTTG AAAAATTAAT TCCTCAAAAA GAAGAAGAAC TTGAAAAACT TCAAGGAATG CTTTGTGCTG AGGAAGTTTA TTCAAATCCA GAAGAAAGTG TAAGAGTAAA TAAAGAAATT AATTCAGTTC AAGAAGAAAT AGATTCTCTT TACGCTACTT GGGAAGAGCT TTCTGAATCT CTTGAAGAAT AA
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Protein sequence | MIILSCRHLT KSFGIDEILR DVTFNINEGD KVGLIGPNGE GKSTLFKILT KQLDYDSGEL FLDKNKTLGY LSQNLSLDSE NTIYDEMLSV FSSLTELEDK IKTLEEKLNE PYDASKEEYH NKLIKDYTLS QELYENRGGY TFRGEISRVL KGLGFLEEDF NNQIINLSGG QKTRLALCKL LLRKPDLLLL DEPTNHLDLE AIEWLEEYLN GYKGTVFVIS HDRFFLDSVT NTTFELIGGK IHCYNASYTK FLELRKKDIE ARLKAYNLQQ AEIKRQEEII EKFRSFNREK SVRAAESRQK ALDKMDRLEA PEVIKEASKI SFETLVKSGN DVLHIENLKK SYDSLLFENV NLDLKRGEKV ALIGENGRGK TTLFKIIMGM LKQDSGSVSL GKNVFTGYYD QEQSNLNLHK TIIDEVWDDF PNLTTTEIRN YLASFLFTGD DVFKEISLLS GGEKCKINLL KLMLSKANLL LLDEPTNHLD IMSREALEDA ILSYDGTLIV ISHDRYFLNK VINKIVELQE NGLKTYLGNY NYYMDKKANP NRYEDIDEEI NQGKTKTQIK EERKKKKSAE KSARALRAQL RDVEKLIPQK EEELEKLQGM LCAEEVYSNP EESVRVNKEI NSVQEEIDSL YATWEELSES LEE
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