Gene CPR_1432 details

Gene Information

• Locus tag: CPR_1432
• ID: 4206391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1610586
• End bp: 1612646
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642565986
• Product: AraC family transcriptional regulator
• Protein accession: YP_698751
• Protein GI: 110803556
• COG category: [K] Transcription
• COG ID: [COG2207] AraC-type DNA-binding domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00438113
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGAAAAG AATATGTTAA TTTCCCTTCA GACATACCTG TAACCATATC TTATGTAAAC 
ATAAAAAACT ATCCCTTGCA TTGGCATGAT GCAATAGAAA TACTTTATGT CCTTAAAGGC 
AGCATAAAAG TAGATATAGA TACTGACAGT TATGAAATAC AAGAAGATGA AATTGAAATA 
GTAAACACAG AACAAACTCA TAGAATTTAT TCTAATAAGG ATAACAGAGT TTTAATATTT 
AAAATAGATC CACACTTTTT TGAAAAATAC TATAGCGACA TAGAAAATAT GTTTTTCTAT 
ACTAATACCT CTGATGAAGG TGCTCAAAGT GATGAATCTT ACGATAAACT TAGAGTATTT 
TTATCCATTA TATTATGTGA AGAAGCTCAA AAAGTAGATG ATTATGATAA ATATATAGAA 
AAATCTCTAG TAGAGCTTTT ATTCCACCTT TTAAATAATT TCCACTATCT TTTATATGAT 
AATGATGAAA TTCATGAGAA TAATATGCTC CTAGAAAGGT ACCATAGAAT TTCTAAGTAT 
ATATATAATA ACTACAATAA GAATATAACC TTAAAAGATA TTGCTAATAC TGAGTTTCTT 
AGTACGCACT ATCTTTCCCA TGAAATAAAA TATGCAACAG GACTAAGCTT TACAGACCTT 
CTAAACTTAA CTAGAGTTGA AGAATCAGTA AAACTTCTTT TAGATACTGA TAAGTCCTTA 
TCTGAAATAT CTTATGAAAT AGGCTTTTCT CATACTCGTT ATTTTAATAA ACATTTTAAG 
GCCTATTATA ATTGCACTCC TCTTCAATTT AGAAAAAAAC ATAAAATAAG TGAAGAGGAA 
TATAATAAAC AAAAAGAAAT AACATACTAT CCATTAACTG ATAGTCTTGA GGAACTTTCT 
TATTACTTAG ATGATTACCC AAGATTTAAT TATGAAGATA AGATTCATAA GCTTACTTTT 
AATATGAATA CTGAAGGCAC TGAATTTAAT AAGTACTTTA AAGAAGTTCT TAATGTAGGA 
GATGCCTTTG ACTTATTATT AGAAGATAAC CAAGATATTG TTGAAGATCT TCAAGATCAT 
ATAGGTTATA ACTATATAAG ACTTCTACAT GTATTCTCAT CAGATATGGG TATATTCCCT 
GGTTCAAAAT TCTTTAACTG GACTAGAACC TTTGATATTT TTGAATATAT ATCTTCATTA 
GACTTAATCC CTTTAATAGT ACTAGATGAT TTTGGATATT CTAAGGATAA TTTCTTAGAT 
GTTATAAAAT CCTTCATAGA CTTTTTTAGC GAGGTAGAAA GTTTTGAATT AACAGATTTA 
AAATTTCAAT TTACCTCTAC ATTTAATGAA GAACTAAAAA ATTCTTTAAT TGAATTATTT 
GAATCTAAGG ATTTAACTTT AGTAAATGAA CTTTATACTC CAAATAATAA AATAGATTTA 
ATATATGACA CAGCTTATAT GCTTCCATTT ATAATTCATA ATACTGTAAG CTCAGGAAGC 
AAGTTAAACT TTATAAAAGC CTTTGATGCC TTAGATAGAC AAATTGATAT TACAAATGAA 
GTTTTCTTTG GCTATCCTGC AATGGTAAAT GATAAAGGAA TTAAAAAGCC CTCTTATTAT 
GCTTACTATT TTTTAAGCAA ACTAGGAGAC ACCCTTCTTT ATAAGGGAGA TGGATATATA 
CTAACTAAGT CAGAGGATGA ATATCAGCTT CTTGTATATA CCTATAATGA TGAAATTAAT 
TCCCTTATAG ATTTTAAAAA CTTTACTAAG TTAAGAGGGG TTAAAGACTT GGTAGATAAA 
AAACTTTCCT TAAACTTACT TGATTTAGAT AGCGATGTTA GAATAACTAA ATACACCATA 
GGGGAGAACT TTGGCTCTTC ATTTAATTAC TGGCTTTCCA TGGGAAAACC TAAAAGATTA 
AGAAAAGCAG AAAAGGATAT ATTATTCCAA GCTTCCTATC CTAAAATAGA ATTTAAGTAC 
GCTAAAAAAA ATACTATTTT AAATATACAA ACAACTCTTC AAGGATATTG TGCAGAACTA 
TTTATACTAA AAAAAGTTTA A 

 

Protein sequence

MRKEYVNFPS DIPVTISYVN IKNYPLHWHD AIEILYVLKG SIKVDIDTDS YEIQEDEIEI 
VNTEQTHRIY SNKDNRVLIF KIDPHFFEKY YSDIENMFFY TNTSDEGAQS DESYDKLRVF 
LSIILCEEAQ KVDDYDKYIE KSLVELLFHL LNNFHYLLYD NDEIHENNML LERYHRISKY 
IYNNYNKNIT LKDIANTEFL STHYLSHEIK YATGLSFTDL LNLTRVEESV KLLLDTDKSL 
SEISYEIGFS HTRYFNKHFK AYYNCTPLQF RKKHKISEEE YNKQKEITYY PLTDSLEELS 
YYLDDYPRFN YEDKIHKLTF NMNTEGTEFN KYFKEVLNVG DAFDLLLEDN QDIVEDLQDH 
IGYNYIRLLH VFSSDMGIFP GSKFFNWTRT FDIFEYISSL DLIPLIVLDD FGYSKDNFLD 
VIKSFIDFFS EVESFELTDL KFQFTSTFNE ELKNSLIELF ESKDLTLVNE LYTPNNKIDL 
IYDTAYMLPF IIHNTVSSGS KLNFIKAFDA LDRQIDITNE VFFGYPAMVN DKGIKKPSYY 
AYYFLSKLGD TLLYKGDGYI LTKSEDEYQL LVYTYNDEIN SLIDFKNFTK LRGVKDLVDK 
KLSLNLLDLD SDVRITKYTI GENFGSSFNY WLSMGKPKRL RKAEKDILFQ ASYPKIEFKY 
AKKNTILNIQ TTLQGYCAEL FILKKV