| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1431 |
|---|
| Symbol | |
|---|
| ID | 4205358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1610042 |
|---|
| End bp | 1610332 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642565985 |
|---|
| Product | GIY-YIG domain-containing protein |
|---|
| Protein accession | YP_698750 |
|---|
| Protein GI | 110803023 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00206814 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTACTT TGAATTATGT TTATATTTTA AAATGTAAGG ATGAATCTTT ATATACTGGA
TGGACTAATA ATTTAGAAAA AAGAATAAAA GCACATAATA ATGGATGTGG AGCTAAATAC
ACAAGAGGAA GAGGGCCAGT AAAACTTGTT TACTTTGAAT CTTTTGAGAA TAAAAGAGAA
GCTCAAAGTA GAGAGTATTA CATAAAGAAG CTTACAAGAA ATCAGAAGTT ACAATTAATA
AGTAGCAAAA GTATTGAGGA GGAAAATTAT GAAAAAGAAA TTAACCTATG A
|
|---|
| Protein sequence | MITLNYVYIL KCKDESLYTG WTNNLEKRIK AHNNGCGAKY TRGRGPVKLV YFESFENKRE
AQSREYYIKK LTRNQKLQLI SSKSIEEENY EKEINL
|
|---|
| |