Gene CPR_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1415 
Symbol 
ID4206302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1590446 
End bp1591126 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content30% 
IMG OID642565969 
Producthypothetical protein 
Protein accessionYP_698734 
Protein GI110803623 
COG category[S] Function unknown 
COG ID[COG3819] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0773605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACTGA TAGGAATAGT AATAGTAATA ATAGGATTTG CACTTAAATT TGATACTATA 
GCAGTTGTAT TAGTAGCAGG ATTGTCAACT GGATTAGTAG CACATATGAG TTTATATGAA 
ATATTAGAAA AATTAGGATC AACCTTTGTA AGCCAAAGAC ACATGACATT ATTTATATTA 
ACTTTACCTG TAATAGGTAT GTGTGAAAGA TTTGGTTTAA AAGAGAGAGC TATAACCTTA 
ATAAAGAATA TGAAAAATAT GTCAACTGGA AAGCTTTTAA GTTGCTATTT ATTTATTAGA 
GAAGTTGGAT CTGCAGTTTC ACTAAGATTA AGTGGACAAG CACAATTTAT AAGACCACTT 
ATAAACCCGA TGGCTCAAGG AGCAGCTATC AGTAAATATG GGAAATTAGA TGATAAAAAT 
GAAGATTTAA TAAAAGGAAC AGCAGCTGCT ATGGATAATT ATGGAAACTT CTTTGGACAA 
AATGTATTTT TAGCAAGTTC AGGAGTTCTT TTAATAGCAG GAACTTTAGA AGAAATAGGT 
TATGGAGTTA ATGCTTTAGA TATAGCAAAA GCTTCGGTTC CAATAGCTAT AATAGCTTTA 
ATATTAGGAG TATTACAAAA TAGATTATTA GATAAAAGGT TAAGTAGAAA CCTATCAAAG 
AACAAAGAAG AGATAAAATA G
 
Protein sequence
MELIGIVIVI IGFALKFDTI AVVLVAGLST GLVAHMSLYE ILEKLGSTFV SQRHMTLFIL 
TLPVIGMCER FGLKERAITL IKNMKNMSTG KLLSCYLFIR EVGSAVSLRL SGQAQFIRPL 
INPMAQGAAI SKYGKLDDKN EDLIKGTAAA MDNYGNFFGQ NVFLASSGVL LIAGTLEEIG 
YGVNALDIAK ASVPIAIIAL ILGVLQNRLL DKRLSRNLSK NKEEIK