Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1407 |
Symbol | |
ID | 4204589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1583174 |
End bp | 1583902 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565961 |
Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative |
Protein accession | YP_698726 |
Protein GI | 110802398 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGAT CTATATATTG GTATGGAAAA GGATATGCCT GGACATTAAT AAAATCCTTA TCTGATATAA AAAAAATAAA TAAAATGGAA GAGGAAGGTA AGCTTGAGGA AAGAGATGAA TACATATATC AATGCAGTAG AAGAATAGCT CATACTTTTC TTAAGGATGC TGGAATAGAA GTTAATGTTG AAGGTTTAGA GAATATTCCT GATGGACCTG TTCTTTTTGT TTGTAACCAT CAAAGCAATA TGGATATTCC TGTAATTATG TACTCTATTG ATAGACCAAA GGGATTCATA GCAAAAAAAG AACTTGAAAA AATGCCTATA TTAAAAGATT GGATAATACT TTCAAAGGCT ATATTTATTG ATAGGGAACA TCCTAAAAAA GCTATGGCAG GTATTATACA AGGAATTAAA CAATTAAAAG AAGGATATTC AATGGTTGTT TTTCCTGAGG GAACAAGAAG TCAATGTAGT AAAATGGGAG AATTTAAAGC TGGTAGTTTT AAATTAGCTA CTAAACCAAA GGTTCCTATA GTTCCACTTA CAATTGATGG AACATATAAA ATAATGGAAG GAAATCATTA TTTCATAAAA CCTGGTAAAG TAAATCTTTA TATTCATCCA CCAGTTTATA CTGATAAACT TACAAAGGAA GAAATTACAG AGCTTCCTGA AAAAGTTGAA AATATAGTTA GAAGTAAACT TCCTAATAAA GGAATATAA
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Protein sequence | MFRSIYWYGK GYAWTLIKSL SDIKKINKME EEGKLEERDE YIYQCSRRIA HTFLKDAGIE VNVEGLENIP DGPVLFVCNH QSNMDIPVIM YSIDRPKGFI AKKELEKMPI LKDWIILSKA IFIDREHPKK AMAGIIQGIK QLKEGYSMVV FPEGTRSQCS KMGEFKAGSF KLATKPKVPI VPLTIDGTYK IMEGNHYFIK PGKVNLYIHP PVYTDKLTKE EITELPEKVE NIVRSKLPNK GI
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