Gene CPR_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1389 
Symbol 
ID4206306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1560826 
End bp1562412 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content31% 
IMG OID642565943 
ProductDEAD-box ATP dependent DNA helicase 
Protein accessionYP_698708 
Protein GI110803627 
COG category[K] Transcription
[L] Replication, recombination and repair
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.67125e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATA TAAAATTTGA TGACTTAGGT CTTAAGGAAA GCTTACTTAA AGCTATAAAA 
GATATGGGAT TTGAAGAGCC ATCTCAAATA CAAGCTGAAA GTATTCCTGT AGCCCTAGAA
GGACACGATA TAATCGGTCA AGCTCAAACT GGTACTGGTA AAACAGCTGC TTTTGGATGC
GCTATAATAA ATAATGCTGA TTTTTCAGGA AAGAAGAAAT CACCAAAAGC ACTTATTTTA
GCACCAACTA GAGAGCTTGC TATACAAGTT AATGAAGAAC TTGTAAGACT TGGAAAACAT
GAAAAACTTT CTGTTTTACC AATATATGGT GGTCAGCCAA TAGATAGACA AATTAGAGCT
TTAAAAAATG GTGTTGATAT AGTTGTTGGA ACACCTGGTA GAGTGTTAGA TTTAATAAGA
AGAAAGAGTT TACCTCTTAA CGATATAGGA TTCCTAGTGT TAGATGAAGC TGACGAAATG
TTAAACATGG GATTCATCGA TGATTTAGAA GAAATTGTTA AATCATTAAA AACTGATAGA
CAAACACTTT TATTCTCTGC TACTATGCCT CCACAAATAA AGAAATTAGC TAGAAATTAC
ATGAAAGAAG ATACTAAGCA TATCGCAATA AAGAAAAGTT CTTTAACAGT TTCAAAAATA
GAACAATTTT ATTTTGAAAT AAAACATAGA GATAGATTTG AAACACTTTG TAGAGTTTTA
GATTTTGATG AACCAAATGC TGCAATAATT TTCTGCAAAA CAAAAAAAGG TGTTGACGAA
GTTGTAGAAA AAATGCAAGC TAGAGGATAT ATGGTTGAAG GTATGCACGG AGATATGAGC
CAAAACCATA GACTTCAAAC TTTAAGAAAA TTCAAAGAAG GAAGCTTAGA TTTCTTAGTT
GCTACTGATG TTGCAGCTAG AGGAATAGAT GTTGAAAGCG TAACTCACGT TATAAACTAC
GATCTACCAC AAGACAATGA AAGTTATGTA CATAGAATCG GAAGAACAGG TAGAGCTAAT
AGAGAAGGAG TTGCCTATTC TTTAGTTACT CCAAAAGAAT ATATGATGCT TAAGCAAATA
CAAAAGCATA CTAAGAGTAA AATAATAAGA AAAGCTGTAC CTACAGTTGA TGAAATATTC
CAAAATAAAC ATAATAACAT AATAAATAAT GTAAAATCTA CTATAGAAGA AGCTTCAGAA
GATTTCCAAA AGTTTATTCC AATAGCTACT CAACTAGATG AGGATTATAG CTTAGTAGAT
GTTGCAGCTG CTCTTTTAAA AATAGTATTT GATAAAGAAT CTTCTTTTGA TTACACTTCA
AATTCTATAG AAGCTCCTGT AATGGACGAA ACTAGATTAT TTATGTCTGT TGGAAGAAGA
GATGGTATAA CTCCTAAATC TCTTGTTAAC TTCTTAAAAG AGACTGCTAG AATAAGCCCT
AAGCAAGTTG GAGATATAGA CATAAAAGAA AACTTCTGCT TTGCTAATGT TGATGCTGAT
GCAGTAAATA ATATAATGAA AAAATCAATG GGTAAAAAAC TTAACAAAAG AACTGTTAAT
ATAGAAGTTG CTAAAAAAAG AAAATAA
 
Protein sequence
MNNIKFDDLG LKESLLKAIK DMGFEEPSQI QAESIPVALE GHDIIGQAQT GTGKTAAFGC 
AIINNADFSG KKKSPKALIL APTRELAIQV NEELVRLGKH EKLSVLPIYG GQPIDRQIRA
LKNGVDIVVG TPGRVLDLIR RKSLPLNDIG FLVLDEADEM LNMGFIDDLE EIVKSLKTDR
QTLLFSATMP PQIKKLARNY MKEDTKHIAI KKSSLTVSKI EQFYFEIKHR DRFETLCRVL
DFDEPNAAII FCKTKKGVDE VVEKMQARGY MVEGMHGDMS QNHRLQTLRK FKEGSLDFLV
ATDVAARGID VESVTHVINY DLPQDNESYV HRIGRTGRAN REGVAYSLVT PKEYMMLKQI
QKHTKSKIIR KAVPTVDEIF QNKHNNIINN VKSTIEEASE DFQKFIPIAT QLDEDYSLVD
VAAALLKIVF DKESSFDYTS NSIEAPVMDE TRLFMSVGRR DGITPKSLVN FLKETARISP
KQVGDIDIKE NFCFANVDAD AVNNIMKKSM GKKLNKRTVN IEVAKKRK