| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1363 |
|---|
| Symbol | |
|---|
| ID | 4204377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1534529 |
|---|
| End bp | 1535032 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642565917 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_698683 |
|---|
| Protein GI | 110801761 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.014486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA GATTAATAGA AGAACACGAA TTAAATAAGG TTAAAAGTAT TTATGATAAT
GTTGTAAAAG AAATGAATTT AAGAGGACTT TATAATTGGA ACGAAAGTTA TCCCAATACT
GAAATAATTT TTAAGGATAT CTCTAATAAA CATCTTTATG GAATAGAAAC TTCTGGAGAA
ATAGTAGCTG TTGCCACTAT TAATGATTAT GCTTATGATG TTTATAACGA TATTGCATGG
CAAGTTGATG GACCATTTTT GTCATTTCAC AGAATAGCTG TCTCACCATC TCACAGAGGA
AAAGGATATG GAAGAAAAAT GATAGATTTT GTAGAAAAAA TGGCAAAGGA AAAAAAGTGC
AATTCCATAA GAATTAGTGC TTATCATAAA AATGAAAATG CAGTTAATTT ATATAAAAAC
TTAGGATATG TACATGTAGG AGAAATGATG TCTATGAGAG ATATAGTAGA ACCTTTCTTA
TGTCTTGAAA AATCAATAAT GTGA
|
|---|
| Protein sequence | MKIRLIEEHE LNKVKSIYDN VVKEMNLRGL YNWNESYPNT EIIFKDISNK HLYGIETSGE
IVAVATINDY AYDVYNDIAW QVDGPFLSFH RIAVSPSHRG KGYGRKMIDF VEKMAKEKKC
NSIRISAYHK NENAVNLYKN LGYVHVGEMM SMRDIVEPFL CLEKSIM
|
|---|
| |