| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1360 |
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| Symbol | rnz |
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| ID | 4206011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1531624 |
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| End bp | 1532574 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565914 |
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| Product | ribonuclease Z |
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| Protein accession | YP_698680 |
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| Protein GI | 110803916 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0966966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAATG TAACCTTGTT AGGAACAGGG GGAGGCATGC CTATGCCAAA TAGATTTTTA
TCATCAGTTG TTATGAATTT CAAGGGGAGA AAAATTCTTT TAGACTGTGG AGAGGGCACG
CAGGTTTCTA TGAGGGTAAA TGGAACTGGA TTTAAAAGTA TAGATATTAT TTGTATAAGT
CATCTTCATG GAGATCATAT ATATGGATTA CCAGGATTAC TTTCTACAAT TGGGAATAGT
GGAAGGGTAG AAGAAATATA TATAATAGGA CCTAAGGGAA TAAAAGAGGT TATAGATGGA
TTTTTAATAA CTCTTCCATA TCTTCCATAT AAACTTAACA TACTAGAAGA TGTAAGTGAT
TTAGAATTCA TGGTTAAAAA AGAAAAAATG GAATTAGTTG AATTGAATGA AAAAATAAGT
TCGGATTTAA GTATAAAAAC TCTAGAATTA GACCATTCTT CTCCTTGTTT AGGATACTCT
TTTAATATAA GGAGAGGAAG AAAATTTAAT GTTGAAAAAG CTTTAATGAA TAAAGTTCCA
AAGGAAGTGT GGTCTAAACT TCAAAGAAAT GAGGAAGTTA GTTTAAATAG AGTTAAATAT
TATAGTTATA TGGTCTTAGG AGATGAAAGA AAGGGAATAA AATTAAGTTA CACAACAGAT
ACAAGACCTA CAGAGGATAT ACCAGGTTTT ATAAAGGAAA GTGATTTATA CATATGTGAA
GGGACTTATG GAAGTGAAGA GGATATGCAT AAGGCCATAA AAAATAAACA TATGACTTTT
AAGGAGGCAG CTGATTTAGC TAAAAAGGGT CAGGTAAAGA AATTATTATT AACTCATTTT
AGTCCAGCTA TTAATGATCC AAAGGAATAT ATACATAATG CAAGAGAAGT ATTTGAAAAT
TCCCATGCTG GAAGTGATGG AGAGGAAAGA ATTTTAAATT TTAAAGAATA A
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| Protein sequence | MLNVTLLGTG GGMPMPNRFL SSVVMNFKGR KILLDCGEGT QVSMRVNGTG FKSIDIICIS
HLHGDHIYGL PGLLSTIGNS GRVEEIYIIG PKGIKEVIDG FLITLPYLPY KLNILEDVSD
LEFMVKKEKM ELVELNEKIS SDLSIKTLEL DHSSPCLGYS FNIRRGRKFN VEKALMNKVP
KEVWSKLQRN EEVSLNRVKY YSYMVLGDER KGIKLSYTTD TRPTEDIPGF IKESDLYICE
GTYGSEEDMH KAIKNKHMTF KEAADLAKKG QVKKLLLTHF SPAINDPKEY IHNAREVFEN
SHAGSDGEER ILNFKE
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