Gene CPR_1345 details

Gene Information

• Locus tag: CPR_1345
• Symbol: galK
• ID: 4206052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1517637
• End bp: 1518800
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 642565899
• Product: galactokinase
• Protein accession: YP_698665
• Protein GI: 110803879
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0153] Galactokinase
• TIGRFAM ID: [TIGR00131] galactokinase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.659508
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTAA ATACACTTAA ATCAACTTTT ATTAATAATT TTGGTAAAGA ACCTAATTCA 
TTATTCTTCT CACCAGGAAG AATAAATCTT ATAGGTGAAC ATATTGACTA CAATGGGGGA 
TTCGTATTTC CTTGCCCAAT AACTCTTGGA ACTTTTGCAG CGGCAACCTT AAGAGATGAT 
AGAATTTGTA GAGCTTACTC TCTTAACTTT GAATCTCTTG GAGTAATAGA GTTTTCTTTA 
GATGATTTAT CTTATAAAAA AGAGGATAAT TGGACAAACT ATCTTAAAGG AGTACTAAAA 
GTACTTATAG AAAAAGGATA TAAAATAGAT AAAGGTATTG ACTTAGTTAT CAATGGAAAT 
CTTCCAAACG GAGCTGGTCT TTCCTCTTCA GCATCTTTAG AAATGTTAAT AGTAAAAATT 
TTAGATACTT TCTTTTCTCT TAACATTTCA AAGGTAGATG CTGCACTAAT AGGTAAAGAG 
GTAGAAAATA CTTATATAGG TGTTAATAGT GGTATAATGG ATCAATTCGC TATTTCTCTA 
GGAGAAAAGG ATAAGGCAAT TTTACTTGAT TGTAATAGCT TATATTATGA ATATGTTCCT 
TTAAACTTAG GAGATAATTC AATAATTATA ATGAACACTA ATAAAAGACG TGAACTTGCA 
GATTCTAAAT ATAATGAAAG AAGAAAAGAA TGTGATGATT CTTTAGACAC TTTAAAGAAA 
TATACTAATA TTTCTTCTCT TTGCGAACTA ACTTCCTTAG AATTTGAAAC ATATAAAGAT 
AAAATAGAAG ATTCTAATAA ATTACGTAGA TGTGTACATG CTATTTCTGA GAATGAAAGA 
GTAAAAGATG CTGTAAAAGC TTTAAAAGAA AATAATCTTG AATTATTTGG ACAACTTATG 
AATCAATCTC ATATTTCTCT TAGAGATGAT TATGAAGTTA CTGGTAAAGA ATTAGATACC 
CTAGCTGAAA ATGCTTGGAA ACAACCTGGA GTTTTAGGTG CTCGTATGAC TGGGGCTGGC 
TTTGGTGGAT GTGCCATAGC AATAGTTAAT AATAATCATG TTGATGAATT TATTAAAAAC 
GTTGGACAGG CTTATAAGGA TGCTATAGGA TATGAAGCAT CATTCTATGT TGCTTCTATA 
GGTAATGGTC CTACTGAACT TTAA 

 

Protein sequence

MELNTLKSTF INNFGKEPNS LFFSPGRINL IGEHIDYNGG FVFPCPITLG TFAAATLRDD 
RICRAYSLNF ESLGVIEFSL DDLSYKKEDN WTNYLKGVLK VLIEKGYKID KGIDLVINGN 
LPNGAGLSSS ASLEMLIVKI LDTFFSLNIS KVDAALIGKE VENTYIGVNS GIMDQFAISL 
GEKDKAILLD CNSLYYEYVP LNLGDNSIII MNTNKRRELA DSKYNERRKE CDDSLDTLKK 
YTNISSLCEL TSLEFETYKD KIEDSNKLRR CVHAISENER VKDAVKALKE NNLELFGQLM 
NQSHISLRDD YEVTGKELDT LAENAWKQPG VLGARMTGAG FGGCAIAIVN NNHVDEFIKN 
VGQAYKDAIG YEASFYVASI GNGPTEL