Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1336 |
Symbol | thiE |
ID | 4204047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1507732 |
End bp | 1508355 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565890 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_698656 |
Protein GI | 110801454 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.108459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATA AAGATTACAA AAAATTATAT TTAGTAACAG ACTATAGAAT TCCTTTTAAT GAGCTTTTAG AAAAAACAAA GGAAGCTTTA ATTGGAGGGG TATCCATTGT TCAATATAGG GCAAAGAATA AAGAAACTAA AGAAATGTGT AAAGAAGCTA GAGCTTTAAA AAAGCTTTGT GATGAGTTTG GAGCATTATT CTTAGTAAAT GATAGAATTG ATGTAGCCTT AGCAGTAAAA GCTCATGGAG TTCATATAGG GCAAGATGAT ATGGATGTTT CTATAGCAAG AGAAATAATG CCAAAGGATG CAATTATAGG TGTTACTGTT CATAATAAAG AGGAAGCTTT AAAAGCTATA AAAGATGGAG CAGATAACTT AGGTGTTGGA GCTTTATTTT CAACTAATAG CAAAGATGAT GCAACATTAA TGACTTTAGA AACCTTAAGA GAGATAAAAT CAGTCTCTAA TATTCCACTT TATGGAATAG GGGGTATAAC TCCTTATAAC TTGAATAAGG ATATTTTAGA AAATCTAGAT GGGGTAGCTG TCATATCTGC TTTGTTAAAT AGTGATAATA TAAGAGAAAA AAGCAAGGAA TTTTTAAATA TTCTTAGTAA ATAA
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Protein sequence | MSNKDYKKLY LVTDYRIPFN ELLEKTKEAL IGGVSIVQYR AKNKETKEMC KEARALKKLC DEFGALFLVN DRIDVALAVK AHGVHIGQDD MDVSIAREIM PKDAIIGVTV HNKEEALKAI KDGADNLGVG ALFSTNSKDD ATLMTLETLR EIKSVSNIPL YGIGGITPYN LNKDILENLD GVAVISALLN SDNIREKSKE FLNILSK
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