Gene CPR_1329 details

Gene Information

• Locus tag: CPR_1329
• Symbol: pssA
• ID: 4204917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1499629
• End bp: 1500150
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642565883
• Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
• Protein accession: YP_698649
• Protein GI: 110802877
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1183] Phosphatidylserine synthase
• TIGRFAM ID: [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00546701
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA GTAGTATACC AAATATATTT ACTTTTATAA ACCTATCTTT TGGTATATTA 
TCATTATTAG CAACATTTAA ATCTGAGTAT TTATTAGCAG CAATATTCAT ACTTCTTGCT 
GGATTAGTTG ATAGATATGA TGGAAGAGTT GCTCGTTATT TAAATGTTTC TAGTGATCTT 
GGTAAGGAAC TAGATTCTTT AGCAGATTTA GTATCATTTG GTGTGGCACC ATCAGTACTA 
ACTTTTGTAT TTTATAATTT TGAATCTTTA GGTCCTATGG GAATTATAGG TTATGCATTA 
TTACTTTGCT TCCCTATTTG TGGAGCTTTT AGATTAGCTA GATACAATGC AACTGAATTT 
GACGGTGTAT TTAGAGGAGT ACCTATAACT ATTGCTGGAG CTGTTGTTGC TTTATTTATT 
TTATTATCAA TAAAGTTTAA TTTAAATATT TTATTCCCAG TAGTAATTTT AGTTATATTC 
TCTTACTTAA TGGTTAGTAA TTTACAATTA AAGAAATTTT AA 

 

Protein sequence

MRKSSIPNIF TFINLSFGIL SLLATFKSEY LLAAIFILLA GLVDRYDGRV ARYLNVSSDL 
GKELDSLADL VSFGVAPSVL TFVFYNFESL GPMGIIGYAL LLCFPICGAF RLARYNATEF 
DGVFRGVPIT IAGAVVALFI LLSIKFNLNI LFPVVILVIF SYLMVSNLQL KKF