| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1300 |
|---|
| Symbol | pgk |
|---|
| ID | 4206472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1470286 |
|---|
| End bp | 1471479 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642565856 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_698622 |
|---|
| Protein GI | 110802225 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCA ATAAAAAGAC TATAGAAGAC GTTCAAGTAA AAGGTAAAAA AGTATTAGTA
AGATGCGACT TTAACGTTCC ATTAAAAGAT GGTGTTATAA CTGATGAAAA CAGATTAAAT
GGAGCTATGC CAACTATAAA ATACTTAGTT GATAATGGCG CTCAAGTAAT CCTTTGCTCA
CACATGGGTA AACCAAAAGG AGAAGCTAAA CCAGAATTCT CATTAGCACC TGTAGCTAAA
AGATTAAGCG AAATGCTTGG TAAAGAAGTA GTGTTTGCTG CTGACGACAA CGTTGTTGGA
GAAAATGCTA AAAAAGCTGT AGCTGAAATG AAAGATGGAG ACGTAGTTTT ACTTCAAAAT
ACAAGATATA GAAAAGAAGA AACTAAAAAT GGTGAAGAGT TATCAAAAGA ATTAGCTAGC
TTAGCTGAAA TGTTTGTTAA CGATGCATTC GGTACTGCTC ACAGAGCTCA CTGCTCAACA
GTTGGAGTAA CTGAATACTT AAAACCAGCA GTATGTGGAT ACTTAATCCA AAAAGAGCTT
AAGTTCTTAG GCGATGCTGT GGAAACTCCA GAAAGACCAT TCGTTGCTAT CTTAGGTGGA
GCTAAAGTTT CAGATAAGAT AAACGTTATA AACAACCTTT TAGAAAAAGT TGATACTTTA
ATAATAGGTG GAGGAATGGC TTACACATTC TTAAAAGCTC AAGGATATAC TGTAGGAAGT
TCATTAGTAG AAGAAGATAA AGTTGAATAC GCTAAAGAAA TGTTAGCTAA AGCTGAGGAA
AAAGGGGTTA AATTATTATT ACCTGTGGAC CACAGAGTAG CTAAAGAATT CAAAGATGTT
GAAGCTGTAG TTACAGAAGA TCAAAACATC GCTGAAGGAT TCATGGGATT AGATATCGGA
CCAAAAACTG AAGCTATCTA CGCTGAAGCT ATAAAAGATG CTAAAACAGT TATCTGGAAC
GGACCAATGG GAGTATTCGA ATTCGAAAAC TTCAACAAAG GAACAATAGC TGTTGCTAAA
GCTATGGCTG AAGCAGATGC TACTACTATA ATCGGTGGTG GAGATTCAGC TGCTGCTGTA
AACATCTTAG GATTCGGTGA CAAAATGTCT CACATCTCAA CTGGTGGTGG AGCTTCATTA
GAATTCTTAG AAGGAAAAGT ATTACCAGGA ATAGCTGCTT TAAATGATAA ATAA
|
|---|
| Protein sequence | MNFNKKTIED VQVKGKKVLV RCDFNVPLKD GVITDENRLN GAMPTIKYLV DNGAQVILCS
HMGKPKGEAK PEFSLAPVAK RLSEMLGKEV VFAADDNVVG ENAKKAVAEM KDGDVVLLQN
TRYRKEETKN GEELSKELAS LAEMFVNDAF GTAHRAHCST VGVTEYLKPA VCGYLIQKEL
KFLGDAVETP ERPFVAILGG AKVSDKINVI NNLLEKVDTL IIGGGMAYTF LKAQGYTVGS
SLVEEDKVEY AKEMLAKAEE KGVKLLLPVD HRVAKEFKDV EAVVTEDQNI AEGFMGLDIG
PKTEAIYAEA IKDAKTVIWN GPMGVFEFEN FNKGTIAVAK AMAEADATTI IGGGDSAAAV
NILGFGDKMS HISTGGGASL EFLEGKVLPG IAALNDK
|
|---|
| |