Gene CPR_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1280 
Symbol 
ID4205197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1447234 
End bp1447983 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content27% 
IMG OID642565836 
Producttranscriptional regulator 
Protein accessionYP_698602 
Protein GI110803289 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.1725e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA CTACAAAAAA TACTAAAAAC CCCAAAAAAT TGCTTTATAA ATCTGTATAT 
GATAAGTTAT ATAAAATGAT TATTGATGGT GAATACCCTT TAAATACAAA ATTGCCATCT
GAGCCTGAGC TTGCAAAAAG TTTTGGGGTT AGCCGAATGA CTTTGCGTCA AGCACTTGCT
TTACTACAAG ATGACGGTTT AGTAAAAAAT ATAAGAGGTA AAGGAAATTT TATAATATCT
CCAGAAAAAC ATACTAAAAT AGATTTTTTA GAGTTAATAG GAAATCCTAT ATACAAGTGT
CATACTGAAA AAATTAAAGA TATTGAATTT GTATTCCGCT TAGAACTTGA TAGTGATTAT
ACTAAACAGG TTTTAGAAAA GGATTCCACA GCAGTGGTTG CTTGTGAACG TTATTATAAA
AGTAAAAATA AAGTTTTAGC CTACGCTTTT ACCTTTATAT CTGTTGAAAC TATAAAAGAA
TTTAAAATAG ATTTAAATAA TGAAAGTGAG CTACTAGACT TTCTTGAACA TAACTCCTAT
GAAATATCAA AAAGTTCTGT ATTAGAAATA AAACATTCCT CTGCTGGTAA CTCCTTAAAT
CCAAAATATA AGCTTGTTGG AGGAAATCAA TGCGATTTAA TTTTAGAAAC ATTATATGAT
AATGATTATT CCCCTCCTAT ATTATTTAAC AAATACTATA TTCCATCTCA ATATAGTACT
TTTAAAATTA AAGCAAGAAA AAAAGAATAA
 
Protein sequence
MKLTTKNTKN PKKLLYKSVY DKLYKMIIDG EYPLNTKLPS EPELAKSFGV SRMTLRQALA 
LLQDDGLVKN IRGKGNFIIS PEKHTKIDFL ELIGNPIYKC HTEKIKDIEF VFRLELDSDY
TKQVLEKDST AVVACERYYK SKNKVLAYAF TFISVETIKE FKIDLNNESE LLDFLEHNSY
EISKSSVLEI KHSSAGNSLN PKYKLVGGNQ CDLILETLYD NDYSPPILFN KYYIPSQYST
FKIKARKKE