| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1227 |
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| Symbol | pncB |
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| ID | 4206553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1379877 |
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| End bp | 1381349 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565783 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_698549 |
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| Protein GI | 110801804 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.507813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATA AGTTTGATGT AAAAAACCCT AGAAATCTTA CAATGCTAGT TGATTTCTAT
GAACTTACTA TGGCAAATGG ATATTTTAAA AATGGCATAG AAAATAAAAT TGCCTATTTT
GATATGTATT TTAGAAGGGT ACCTGATGGT GGCGGCTATT GTATAATGGC TGGTGTTGAG
CAATTAATCG AATACCTATC AAATCTAAAC TTTTCAGAAG ATGATATAGC CTATTTAAGA
TCAAAGGAAT TATTTTGTGA TGAATTTTTA AACTTTTTAA TAAATTTCAA GTTTACTTGT
GATGTTTGGG CAATTCCAGA AGGAAATCCT GTCTTCCCAA ATGAACCTTT AGTTATTGTT
AAGGGACCTG TAATACAAGC ACAGTTTGTA GAAACTATGA TACTTCTTAC TATAAATCAC
CAAACACTTA TAGCTACTAA GGCTAATAGA ATATGTAGAG CAGCTAAGGA TAAGACTGTA
ATGGAATTTG GTTCTAGAAG AGCTCAAGGA TATGATGGAG CAATTTATGG AGCAAGAGCT
GCTGCCATAG GTGGTTGTGA TTCTACAGCC TGTACAATAG CTGATCAAAT GTTTGATATA
CCCGCCATAG GAACTATGGC TCATAGTTGG ATTCAACTTT TTGGAGACGA ATATGAAGCA
TTTAAGGCCT GGGCAGTAGC ATATCCTGAT AACTGTACAT TATTAATAGA TACCTATAAC
GTTTTAAAGT CTGGTGTTCC TAATGCTATT AAGGTATTTG ATGAGGTTTT AAAACCTTTA
GGAAAAAGAC CAAAAGGAAT AAGAATAGAT AGTGGTGATA TAACTTATCT ATCTAAAAAA
TGTAGACAGA TGTTAGATGA AGCTGGATAT CCAGATTGTA AAATAATAGT TTCAAATTCT
CTAGATGAAT ATATAATAAG AGATGTATTA AGCCAAGGAG CTTCAATAGA TGCCTTTGGA
GTTGGAGAAA GACTTATAAC AGCTAGATCA GAACCTGTTT TTGGTGGAGT TTATAAATTA
GTTGCAGTAG AAGATGAAGA AGGTAATATA ATTCCTAGAA TAAAGATAAG CGAAAATGAA
GAAAAAATAA CAAATCCTGG ATTTAAGAGA ATAATAAGAA TATTTGATAA TAATACTCAT
ACAGCCTTAG CTGATTTAAT TCTTCTAAAT GAAGAAGAAA TAGATACTAC TAAGCCATTA
GAGATTTTTG ATCCTATTCA TGTATGGAAA AGAAAAACAT TAACTAATTA TTACGTTAAA
GATTTACTAG TTAAAATATT TGAAGATGGA AAAGTATGCT ACAAAAATCC AACAGTAATG
GAAATTAGAA ATTATGCTCA AAAAGAATGT GAAAAACTTT GGCCAGAAAT TTTAAGATTT
GAAAATCCTC ATACTTACTA TGTTGATTTA TCAAATGGTT TATGGAATTT AAAACATAAT
TTACTTCATA GATATTCTAG CATATATAAA TAG
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| Protein sequence | MDYKFDVKNP RNLTMLVDFY ELTMANGYFK NGIENKIAYF DMYFRRVPDG GGYCIMAGVE
QLIEYLSNLN FSEDDIAYLR SKELFCDEFL NFLINFKFTC DVWAIPEGNP VFPNEPLVIV
KGPVIQAQFV ETMILLTINH QTLIATKANR ICRAAKDKTV MEFGSRRAQG YDGAIYGARA
AAIGGCDSTA CTIADQMFDI PAIGTMAHSW IQLFGDEYEA FKAWAVAYPD NCTLLIDTYN
VLKSGVPNAI KVFDEVLKPL GKRPKGIRID SGDITYLSKK CRQMLDEAGY PDCKIIVSNS
LDEYIIRDVL SQGASIDAFG VGERLITARS EPVFGGVYKL VAVEDEEGNI IPRIKISENE
EKITNPGFKR IIRIFDNNTH TALADLILLN EEEIDTTKPL EIFDPIHVWK RKTLTNYYVK
DLLVKIFEDG KVCYKNPTVM EIRNYAQKEC EKLWPEILRF ENPHTYYVDL SNGLWNLKHN
LLHRYSSIYK
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