| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1223 |
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| Symbol | spoVB |
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| ID | 4204084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1373658 |
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| End bp | 1375274 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642565779 |
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| Product | stage V sporulation protein B |
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| Protein accession | YP_698545 |
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| Protein GI | 110801492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.30797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGC AGTCTATAAC TAAAGGCTTT GCAATACTTT CTATTGCAAG CATAGTTGCT
AAATTATTAT CTTTAATTTA TGTACCTTTT CTTACTAGAA TTGTAGGAAA TGTTGGTATG
GGTATATATG GAAAAACCTA TGATATATTT GTTTTTGTGT ATGCTTTAAC AAATGTAGGT
CTACAAACAG CCATATCAAA ATATGTTTCA GAGTTAGATG CAGTTGGTAA TTACAAAGAT
GCCTTAAGAG CATTTAAGAT TTCAAGAGCA TTTTTACTTG TAGTTGGTAC TATATTTACT
ATAATTTTAA TGTTAAGTGC TAATTTTATA GCAAGTATGA GTCAGACTCC ACAAATGGTT
TATCCAATAA TTTTCTTAGC GCCAACAATT ATGATAACAA CAGTCTTAGT TACTTATAAA
GGATACTTCC AAGGAAGATC TCAAGCAACA CCAATAGCTA TAGCAACAGT TATTGAACAG
GTTGCAAATG TATTTTTAAG TTTATTATGT GCATATTTCC TTATAAAGAA AAGTGTATCT
TTAGGGGTTG CAGGAGGAAC TATAGGATCT TCTGCTGGAG CCTTAATGGC AGTATTATAT
TTAATATACA TATATAATAT ATATGGAATT GAAAAAGAGG CTAAAACAAA ACAAGAGCCT
GGAGTTAGAA GAATTACAGG TAAAAAAATA GCAAGAACTT TATTTAAATA TGGATTACCA
ATAACTCTTA GTACTGGTCT TCAAAACTTA GGAAATATAA TAGATATGTT AACTGTAAGT
AATAGACTTG TTGATGCAGC TAACTTTTCT CAAAGTGATG CTAATGCACT TTATGGATAT
TTTTCAACAA GATATAAAAT TTTAATAAAT GTTCCAATGG TATTTATAAC TTCTTTAGGA
TACATGGCCT TACCTGCAAT ATCAAGAGCA TATGCTTTAA AAGATAAAAA AGAGATAAAA
AGTAAGATTA ATTTCTCTAT GAGAGTTACA TATCTTTTAT CAATACCTTC AGCCTTTGGA
TTGGCTTTAT TAAGTGAAAA TATATATAGA TATATTTTTG CAGATTCAAA TGGATATAAA
ATGATGGTAA TAGGTGCTGC TATGATACCA TTAACGGCAA TAGTTCTTAT GCAAAATGTA
ATACTTCAAA GTGTAAGTCA ATTTTACTAT GTATTATTTA CCTTAGCTCT TAGTATTGTA
GTTAAGTTTA CATTAAATAT GACTTTAGTT GCAAATTCAG ATATAAATAT TTATGGAGCT
GTAATTTCTG GAATGGTGGC TTTTGTAATT TCTTTAGTAC TTAATCACTT TAGAATGAAA
AAAACATTAA AGATGAAAAT ATCAATGTTA AAGTATGCAT TAAAACCTTT ATTAGCATCA
ATATACATGG GTATAGGAAT AATACTTAGC AAATATGTAA TATCTTTATT TATAGATTTT
GATAAGTTAA GTTTAATATT AGGCATAGCT ATATTACTAG TAATTATAGC TATAGGTTCA
TTTATGTACC TTCATGCTAT TATAATTCTA GGAGGAATTA AAAAGGAAGA TATAGAAGAA
ATTTCACCTA AACTTTTAAG AGTTATGCCA AGATTTTTAA GAAAAAATAT AAAATAA
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| Protein sequence | MKEQSITKGF AILSIASIVA KLLSLIYVPF LTRIVGNVGM GIYGKTYDIF VFVYALTNVG
LQTAISKYVS ELDAVGNYKD ALRAFKISRA FLLVVGTIFT IILMLSANFI ASMSQTPQMV
YPIIFLAPTI MITTVLVTYK GYFQGRSQAT PIAIATVIEQ VANVFLSLLC AYFLIKKSVS
LGVAGGTIGS SAGALMAVLY LIYIYNIYGI EKEAKTKQEP GVRRITGKKI ARTLFKYGLP
ITLSTGLQNL GNIIDMLTVS NRLVDAANFS QSDANALYGY FSTRYKILIN VPMVFITSLG
YMALPAISRA YALKDKKEIK SKINFSMRVT YLLSIPSAFG LALLSENIYR YIFADSNGYK
MMVIGAAMIP LTAIVLMQNV ILQSVSQFYY VLFTLALSIV VKFTLNMTLV ANSDINIYGA
VISGMVAFVI SLVLNHFRMK KTLKMKISML KYALKPLLAS IYMGIGIILS KYVISLFIDF
DKLSLILGIA ILLVIIAIGS FMYLHAIIIL GGIKKEDIEE ISPKLLRVMP RFLRKNIK
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