| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1218 |
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| Symbol | |
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| ID | 4204691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1370075 |
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| End bp | 1371469 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565774 |
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| Product | Na+ driven multidrug efflux pump |
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| Protein accession | YP_698540 |
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| Protein GI | 110802304 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.530621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAATA GTATGAGCAA AAAAGAAACA GATTTAGGAA GGGATAGTAT TGGAAAGCTT
CTTTTTAAAC TAGCTATGCC AGCTATAATA GCTCAACTTG TTAATGTTTT ATACAATATA
GTAGATAGAA TGTTTATAGG AAGATTGCAA TCTGGTGATA TGGCTATGGC TGGGGTTGGG
GTAGCCTTTC CAATTATAAT GATAGTTTCT GCCTTTAGTG GCTTAGTTGG TATGGGAGGA
GCTCCCTTAG CAGCTATTAA AATGGGAGAA AAGAAAAAAG AAGATGCTGA AGAAATAATG
ACAAATAGTT TTTATGCACT TATAGGATTA GCTTTATTTT TAACAGTATT TTTCTTTGTA
TTTAAGGAGC CAATTTTATG GGCTTTTGGG GCTAGTGATG CAACTATAGG ATATGCTTTA
GATTATTTAG GTATTTATTT AATAGGTACC ATATTTGTTC AAATTGCCTT AGGAATGAAT
CCATTTATAA ATACGCAAGG ATTTACTAAG GTTGGAATGA TAACAGTTAT AGTAGGAGCT
GTAATAAATA TTGTATTAGA TCCAATTTTA ATTTTTGGAT TTAATATGGG AATTAAGGGA
GCTGCTTTAG CAACCATAAT TGGTCAATGC GCATCTGCTA TATGGGTATT ATACTTTTTA
CTTGGAAAAC AAAGTATTCT TAGAATAAGA AAAAAATTCT TAAAGCCAAA ATTAAAAATA
TTATTTTCAA TAATTGATTT AGGAGTATCT CCATTTATAA TGCAAGCTAC TGAAAGTTTA
GTCATAATAA GTATGAATAA TAATTTATTA AAGTATGGTG GAGACTTAGC CGTTGGAGCA
ATGACTATTA TGAGTAGTGT AATGCAAATA ATATTACTTC CATTAATGGG ACTTTCCCAA
GGGGCACAAC CTATAATAAG TTATAACTAT GGGGCTAATA AAGTCTATAG AGTAAAAAAA
GCCTTTAAAT TACTTTTAGT ATCATCAATG GTATTTACCA CAATTATGTG GAGTGCATTA
ATGATTTTAC CAGATGTGTT TGTAAAGATT TTTAATAGCA ATAATCCTCA ATTAATGGAG
ATAACCTCAT GGAGTATTAG AATATACTTT GCAGGTGTTT TGCTTTTTGG TGCACAAGTT
GCTTGTCAAC AAACTTTTTT AGCTTTAGGA CAAGCGAAAA TATCATTAAT TTTAGCCTTA
CTTAGGAAGA TTGTGCTTTT AATACCATTT ATATATATAC TTCCAATGGT TTTTGAAAAT
AAGCTTATGG GAGTTCTTAT GGCAGAACCT TTTGCAGATA TAATAGCAGC CCTATCAACA
GTAACATGCT TTATTGTATT TTATAAAAAA TATTTATCAC AAGGTTTAGA AGAAGAGATA
AAAGTAAATT CTTAA
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| Protein sequence | MVNSMSKKET DLGRDSIGKL LFKLAMPAII AQLVNVLYNI VDRMFIGRLQ SGDMAMAGVG
VAFPIIMIVS AFSGLVGMGG APLAAIKMGE KKKEDAEEIM TNSFYALIGL ALFLTVFFFV
FKEPILWAFG ASDATIGYAL DYLGIYLIGT IFVQIALGMN PFINTQGFTK VGMITVIVGA
VINIVLDPIL IFGFNMGIKG AALATIIGQC ASAIWVLYFL LGKQSILRIR KKFLKPKLKI
LFSIIDLGVS PFIMQATESL VIISMNNNLL KYGGDLAVGA MTIMSSVMQI ILLPLMGLSQ
GAQPIISYNY GANKVYRVKK AFKLLLVSSM VFTTIMWSAL MILPDVFVKI FNSNNPQLME
ITSWSIRIYF AGVLLFGAQV ACQQTFLALG QAKISLILAL LRKIVLLIPF IYILPMVFEN
KLMGVLMAEP FADIIAALST VTCFIVFYKK YLSQGLEEEI KVNS
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