| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1212 |
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| Symbol | |
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| ID | 4204168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1358495 |
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| End bp | 1359991 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565768 |
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| Product | amino acid permease yshA |
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| Protein accession | YP_698534 |
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| Protein GI | 110803526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0367716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCAG AACATAAAAG TAAATTGTCT TTAACAGCGC TTGTATTAAT GATTTTCACA
TCAGTATATG GTTTTGCTAA TATGCCAAAG GCATTTTATT TAATGGGATA TAGTGCTATT
CCATGGTACA TAATATCAGC ATTAGCTTTC TCAATTCCAT ATGCTTTTAT GATGGCAGAA
TATGGTGCAG CATTTAGAAA GGAAAAAGGA GGAATATACT CATGGATGGC TAAATCTGTA
GGCCCTAAAT ATGCCTTCAT AGTTACATTT ATGTGGTATT CATCAAATTT AATATGGTTA
GTTAGTAACT CATCATCAAT ATGGATTCCT TTCTCAAATG TTATATATGG AAAAGATACT
ACAGGAACAT GGTCTTTACT TGGATTAAGC GTTCCACAAA CAATGGCTGT ATTAGGATCA
ATACTTATAA TAGTTATAAC TTATGCAGCA TCTAAAGGAT TAAAGAGTAT AACAAAGGTT
ACTTCAATTG GAGGAACTGT TGTTGCATTA TCAAACATAG TACTTATTTT AGGAGCAATT
ATTGTTTTTG TAAGCAATGG ATTTAAACCA GCTCAGATAA TAAATGGTGC TGCCTTTGTT
CATGCACAAA ATCCATCGTA TCAATCGCCA ATAGGTGTAT TAGGATTTTT AGTTTTTGCA
GTGTTTGCTT ATGGTGGACT AGAAGCAGTA AGCGGATTAG TTGATGAAAC TAAGGATGCT
AAAAAGAATT TTCCAAAGGG ATTAATGATT GCATCTATAA TAATAGCCGT TGGATATGCT
GTTGGAATAC TTTGTGTTGG ATTATTTACA AATTGGCAAG AAGTATTATC AGGGGATAAT
GTTAACTTAG CAAATGTATC ATATATAGTA ATTCAAAACT TAGGTGTAAA ATTAGGACAA
GCTTTTGGCA TGAGCACTAA TGCTTCACTT CAATTAGGAG CTTGGTTTGC AAGATATATA
GGTCTTTCAA TGATGTTAGC CTTAATGGGA GCTTTCTTTA CATTAAGTTA TGCACCAATT
AAACAATTAA TAGAAGGAAC ACCTAAAGAA ATCTGGCCAA AAAAATGGAC AATTTTAAAT
GAAAATAACA TGCCAGTTAA TGCAATGTGG GTTCAATGTA TAGTTGTTGT TATATTTATA
TTAATAGCTT CTTTTGGTGG AGAATCTGCA AATAAATTCT TTAGTTATTT AATATTAATG
GGTAATGTGG CCATGACAAT ACCATATATG TTCTTATCTG GAGCTTTTCC AGCATTTAAA
AAGAAAAAGC ATATAGAAAA ACCATTTATT ATGTATAAGT CATACAAATC ATCATTAATT
TGGTCTATAA TAGTAACATT TACAATTGGT TTTGCAAATT TATTTACAAT AATAAAGCCT
GTTATTCAAG ATAAGGATTA TACAGCTATG GCATTCCAAA TAACTGGACC GATAATTTTC
TCTATAATTG CTTTTATACT TTATCATAAT TATGAGAAGA AAATAAAAAA TAAATAA
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| Protein sequence | MSSEHKSKLS LTALVLMIFT SVYGFANMPK AFYLMGYSAI PWYIISALAF SIPYAFMMAE
YGAAFRKEKG GIYSWMAKSV GPKYAFIVTF MWYSSNLIWL VSNSSSIWIP FSNVIYGKDT
TGTWSLLGLS VPQTMAVLGS ILIIVITYAA SKGLKSITKV TSIGGTVVAL SNIVLILGAI
IVFVSNGFKP AQIINGAAFV HAQNPSYQSP IGVLGFLVFA VFAYGGLEAV SGLVDETKDA
KKNFPKGLMI ASIIIAVGYA VGILCVGLFT NWQEVLSGDN VNLANVSYIV IQNLGVKLGQ
AFGMSTNASL QLGAWFARYI GLSMMLALMG AFFTLSYAPI KQLIEGTPKE IWPKKWTILN
ENNMPVNAMW VQCIVVVIFI LIASFGGESA NKFFSYLILM GNVAMTIPYM FLSGAFPAFK
KKKHIEKPFI MYKSYKSSLI WSIIVTFTIG FANLFTIIKP VIQDKDYTAM AFQITGPIIF
SIIAFILYHN YEKKIKNK
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