| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1209 |
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| Symbol | |
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| ID | 4205232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1355853 |
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| End bp | 1357115 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565765 |
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| Product | vancomycin b-type resistance protein vanW, putative |
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| Protein accession | YP_698531 |
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| Protein GI | 110803032 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000880463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGAAGTA AGAGAATAAA AAAATTAAAT TCAAAAAAGG TAGCACTACA AATTTCACTA
GTACTTATAG CTTTATTCTT AATTTTAATT TCTGTAGTTT TATTTAAAAC TTATTCTAGT
AAAAATGTTA CTTATAAAGG AATTTATGTT GAAAACATTA ATGTGTCAAA TTTAAATGAG
AAGGATTTAA AGGAAAAATT AAATGAGCAC TACTCTGATT TATTAAATAA TTTTAAAATA
ACATTTAATT ATAAAGACAA TTTTAATGAA ACTTTTTCAG CAAAAGATTT AGGATTTTTC
TTTGATATTA ATGATTTATC TAATCAAATT TTTTCTTTCG GAAAAAATAG CAATATATTT
TCTAATACAA TAGAAAGATT AAAGTTAAAG TCTAATCCTA AATATTTTCA GTTTAAACCT
GAATCAAATT CAAAGGTTTT AAGTGAAAAA CTTTCTGAAA TAAGTAATAA AATCAATAAA
GAAAAGGTTG AACCAACTAT TTCTTTTTCA AATGATTCTA TATCAGCAAC TAAAGAACAA
ATTGGGTACA AGCTTAACTT AGAAAAGCTT ACTTCTGAAA TAGTCAATGA TTTAAATAAT
AGTCATGATA GTCTAAATTG TACTATTAAT ATACCTGTAG AAGAAATAAA ACCTAAATTA
ACTCAAGAAA CTGTTAATAA CATGGTTATT TTAGGCTCAT ATACTACTAA ACTTCCTAGT
TTGACAGGAG GTCGTACTAA AAACATTAGC AATTATTTAA GCAAGCTTAA TGGTACCGTA
TTAATGCCAG GAGATATTTT TTCTGCTGAT AAAGAAGGAG AAGATAGAAC TGAAAGTAAT
GGTTATACTT ATGCCCCTGG TTATATTGGA AACAAAGTAG TAGATATATT AGCTGGCGGA
ATATGTCAAG GAGTTACAAC TCTTTATAAC TCAGTATTAT ATGCTGACTT AAAAATAGTT
GAGAGAGCTC CTCATAGCCT TCCAGTAACT TATGCTCCTA TAGGTAGAGA TGCTACTATG
GCAAGTGGAT CTATTGACTT TAAGTTTCAA AATAATATGA ATAATCCAGT TATTGTTCAA
ACTTATATAA CTTCTTCTGG ACAAGTTAAG TCTAACATTT GGGGTATAAA AGAAGATCCA
GGAAAAGAAA TAGTTATATC TGTAGATCAA CATGGACCTA AATCAGCAAC AACTTATAAG
GAAACTTATG AAAATGGAGT ATTAGTAAAA AAAGAAGTGT TATCAAATGA CAAATACAAT
TAA
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| Protein sequence | MRSKRIKKLN SKKVALQISL VLIALFLILI SVVLFKTYSS KNVTYKGIYV ENINVSNLNE
KDLKEKLNEH YSDLLNNFKI TFNYKDNFNE TFSAKDLGFF FDINDLSNQI FSFGKNSNIF
SNTIERLKLK SNPKYFQFKP ESNSKVLSEK LSEISNKINK EKVEPTISFS NDSISATKEQ
IGYKLNLEKL TSEIVNDLNN SHDSLNCTIN IPVEEIKPKL TQETVNNMVI LGSYTTKLPS
LTGGRTKNIS NYLSKLNGTV LMPGDIFSAD KEGEDRTESN GYTYAPGYIG NKVVDILAGG
ICQGVTTLYN SVLYADLKIV ERAPHSLPVT YAPIGRDATM ASGSIDFKFQ NNMNNPVIVQ
TYITSSGQVK SNIWGIKEDP GKEIVISVDQ HGPKSATTYK ETYENGVLVK KEVLSNDKYN
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