Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1199 |
Symbol | pyrF |
ID | 4204771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1344271 |
End bp | 1345134 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642565755 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_698521 |
Protein GI | 110802482 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0530325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGCTG ATAAATTATT TGAAAAAGTA GAAAAAAACG GAGTAGTTTG TGTTGGACTA GATACAAGCT TAGATTATAT ACCAGAGGAG TTTAAAAGTA AGTTTTCAAA TGAAAGCGAT ATGTTATTTG CCTTCAATAA AGAAATAATA GATGCCACAC TAGATGTATC TGCATGTTTT AAAGTTCAAA TAGCTTATTA CGAAGCCCTA GGTCTTAAAG GATTAGAAGC TTATAAAAAT ACCTTAAGTT ATTTAAGAGA AAAGAATGCT TTAATCATAG CTGATATAAA AAGAGGGGAT ATAGCTGCAA CGGCTAAAAT GTACGCAAAG GCTCACTTTG AAGGGGATTT TGAAAGTGAT TTTATAACTC TAAATCCATA TATGGGAATG GATAGCATAG ATCCATACTT ACCTTATATA GAAAAGAATG AAAAAGGAGT ATTTGTACTA GTAAGAACTT CAAATAAAGG AGCTCAGGAT ATAGAGTATC TAGAGGCTGG AGATGGAAAG AAAGTTTATG ATGTAGTTGG AGAAAAGTTA AATACTCTAG GAAAAAACTA TTTAGGAAAA CATGGTTATA GTTCAATAGG TGGAGTTGTA GGTTGTACTC ATCAAGAAGA AGCAAAAGAA ATGAGAGATA AATTAGATAC AATGCCATTT TTAATACCTG GATATGGTGC ACAGGGAGGA ACTGCTAAAG ATGTGGCATC TTATCTTAAA AATGGAAATG GTGGAATTGT AAACTCTTCA AGAAAGATAC TATTAGCCTA TAAAGCTATG GAAGATAATA AAAACTTTGC AGAATGCGCT AGAAAAGAAG CCATTTCAAT GAGAGACAGT ATAAGAGAAG CAATTTTAAA ATAG
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Protein sequence | MIADKLFEKV EKNGVVCVGL DTSLDYIPEE FKSKFSNESD MLFAFNKEII DATLDVSACF KVQIAYYEAL GLKGLEAYKN TLSYLREKNA LIIADIKRGD IAATAKMYAK AHFEGDFESD FITLNPYMGM DSIDPYLPYI EKNEKGVFVL VRTSNKGAQD IEYLEAGDGK KVYDVVGEKL NTLGKNYLGK HGYSSIGGVV GCTHQEEAKE MRDKLDTMPF LIPGYGAQGG TAKDVASYLK NGNGGIVNSS RKILLAYKAM EDNKNFAECA RKEAISMRDS IREAILK
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