Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1193 |
Symbol | |
ID | 4206419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1340773 |
End bp | 1341195 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642565749 |
Product | acetyltransferase |
Protein accession | YP_698515 |
Protein GI | 110803545 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0123933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTAG AAAAAGTGAT TTTAAAAAAA GATTTAATTA AGGATATAAA AAGTATTTCT TCATTATATG AAAGCGCAGG ATGGTTTGAC TATACTGAAG ATTTAGGAAA ATTAGAAGAG GCATTTAAAA ATTCATTAAA GATAATTTCA GCATGGCATG AAGAAAAATT AATAGGTCTT ATTCGAGTTG TTGGAGATGG ACTAACTATA ATATATATAC AAGATATAGT AGTACTTCCC GAATATCAAG GTAATGGTAT TGGTAGAGGT TTGATTGATT TTGTATTAGA TGAATATAAA CATGTTAGAC AAAAGATTCT AATAAGTGAT GATAAAGAAT CTTCAATTGA ATTTTATAAA AACATAGGTT TTAAATCAAT TGATACTTAT AATGGAGTAG CTTTTGTAAG TTATATAGAG TAA
|
Protein sequence | MNLEKVILKK DLIKDIKSIS SLYESAGWFD YTEDLGKLEE AFKNSLKIIS AWHEEKLIGL IRVVGDGLTI IYIQDIVVLP EYQGNGIGRG LIDFVLDEYK HVRQKILISD DKESSIEFYK NIGFKSIDTY NGVAFVSYIE
|
| |