Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1190 |
Symbol | |
ID | 4205021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1338404 |
End bp | 1338817 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565746 |
Product | ISCpe7, transposase |
Protein accession | YP_698512 |
Protein GI | 110801991 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0283879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGTTTA TAAGCGGTAA AAAATATTAT CTATGGCTTG TTATAGACTC TGAAACACGT TTTGTGTTAG CTTTTCATCT AACACAAGCA CGTGATTCTG ATGCAGCATT TATTCTTATG AATCAAGCTA AATCTATGGG TAAACCTAAT AACTTTATCA CAGATAGACT ACCGTCCTAT AATGAAGCAG TTAAAACCGT ATTAAACGAA AGCACTCATA TTCCTGTACC ACCTATGTCT AGTGATACAA AGAATAACTT AATAGAGTCT TTCAATAAAA CATTTAAAGC ATGGTATAAA ACTAAAAAAG GTTTTAATTC TTTTGAAAAA GCTAATAACT TAATATACAT GTTTATATTT CACTATAATT TCATTAGACC TCATGGATCA TTAAACGGCT CTACGCCTGC CTAA
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Protein sequence | MVFISGKKYY LWLVIDSETR FVLAFHLTQA RDSDAAFILM NQAKSMGKPN NFITDRLPSY NEAVKTVLNE STHIPVPPMS SDTKNNLIES FNKTFKAWYK TKKGFNSFEK ANNLIYMFIF HYNFIRPHGS LNGSTPA
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