| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1181 |
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| Symbol | tdcB |
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| ID | 4205420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1330239 |
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| End bp | 1331447 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565737 |
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| Product | threonine dehydratase |
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| Protein accession | YP_698503 |
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| Protein GI | 110802155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000071198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTATTT TGTATTTAGA AAAAATTATT AAAGCCAAAA AAAATATAGA AGATGTAGTC
ATAAAAACAC CTTTAATATA TAGCGAGGTC TTTTCAAGGA AATCTGGAAA CCAAGTGTAT
ATGAAATGTG AAAATTTACA ATTAACAGGT GCTTACAAAA TAAGAGGTGC TTTAAATAAA
ATAAGATCTT TATCAGATGA AGAAAAATCA AAAGGTGTTG TTTGTTCTTC TGCCGGAAAT
CATGCTCAAG GCGTAGCTTT TGCAGCATCA CAAGCTAATG TTAAATCAAC TATAGTAATG
CCAAAGACTA CTCCTCTACT AAAAATCCAA TCAACAAAGG ATTTAGGAGG GAATGTTGTT
TTATCAGGTT ATGTTTATGA TGATGCTTTT AATGAGGCTA AAAGAATTGA ACAAGAACAA
GGAGCCTTAT TTATACATCC ATTTAATGAT ATTGATGTAA TTTGTGGACA AGGTACAGTA
GCCTTAGAAA TATTTGAAGA TTTAAATGAT GTAGATATTA TTCTCTGCCC TATAGGTGGC
GGTGGCTTAA TAAGTGGAGT TACCCTAGCT GCTAAGGCTT TAAATCCTAA TGTTAAAGTA
ATTGGAGTAC AGGGTGAAGG TGCAAATGCA ATGGTTAAAA GTTTTAAGGC AGGAGAAATA
ATTGCTTTAG ACGCTGTTGA TACTATTGCT GATGGAATTG CAGTAAAAAG ACCTGGTGAT
TTAACATTTA AATTTATAAA AGAATATGTT GATGATATAA TAACTGTATC AGATCATGAA
ATTGTTGAAG CATTCTTTAC ATTAAGTGAA AAACATAAAC TTTTAGCAGA AGCTTCAGGA
GCAGTCTCAT TAGCAGCTTC TGCTAAATTA AATTGTAAAG ATAAAAATAT AGTATCAGTA
ATAAGTGGTG GTAATATAGA TATGGTTACT ATAACTTCAT TAATAAACAG CGCATTAGTA
GCTAAAGGAA GACTTTTTGG ATTTAGTTTA GAAGTTCCTC ATAAACCAGG ACAAATATTG
AAGATTGCTA AAGTTCTTGC TGATACTAAT GCTAATATAG TAAAACTTGA ACATGATCAT
TTTAAAGCAA GGGATGCTCT TAAAAATATG GTTATAGAAG TAACTTTAGA GACAAATGGA
CACTCTCACA TAGAGGAAAT AAAAAAAGCT TTAACAGATC AAAATTATGT AATAAAACAA
ATTTATTAA
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| Protein sequence | MIILYLEKII KAKKNIEDVV IKTPLIYSEV FSRKSGNQVY MKCENLQLTG AYKIRGALNK
IRSLSDEEKS KGVVCSSAGN HAQGVAFAAS QANVKSTIVM PKTTPLLKIQ STKDLGGNVV
LSGYVYDDAF NEAKRIEQEQ GALFIHPFND IDVICGQGTV ALEIFEDLND VDIILCPIGG
GGLISGVTLA AKALNPNVKV IGVQGEGANA MVKSFKAGEI IALDAVDTIA DGIAVKRPGD
LTFKFIKEYV DDIITVSDHE IVEAFFTLSE KHKLLAEASG AVSLAASAKL NCKDKNIVSV
ISGGNIDMVT ITSLINSALV AKGRLFGFSL EVPHKPGQIL KIAKVLADTN ANIVKLEHDH
FKARDALKNM VIEVTLETNG HSHIEEIKKA LTDQNYVIKQ IY
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