| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1179 |
|---|
| Symbol | xerC |
|---|
| ID | 4205570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1328050 |
|---|
| End bp | 1329402 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 642565735 |
|---|
| Product | site-specific tyrosine recombinase XerC |
|---|
| Protein accession | YP_698501 |
|---|
| Protein GI | 110802806 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000142279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG AAGGAAATCA ATTCGAAAAT TTTAAATACT CACAAGAAAA CAAAGAATTA
CTGAATATAA ATTTAAGTAA TGATGACTTA AATAATCTTG ATCACATATA TAACTATTAC
GATTCTCAAA ATATCCAGCG TGACTATGAA GATTTAATTG AAGATATTTA TATTTTTGTT
TTCAAGAGAA ATCTAAGTAT TACACAACTG TCAGAGATCT ATAAAGTTAA TCAAAGAATA
ATTAAACGAT GGTTAAAGGA ACTTGGAATG GACAAGCTTT TGGAAGTTGA AAAAAGCACT
AATTCTGTTG AAAAATCAAA TTTTAAAAAT AATAAATCCG ATGAATTACT CAAAAAGAAT
AAATTAAAAT TTGATTTTTT AGAGAAATCG AAGCATCCAA AAAGAGTTAT TGAATTCTTA
AACTACTTAG AAAATGTAAA AGGAAAATCC CTAAACACTG CAAAAGGATA TTCGGTTGAT
TTAGGATTAT TTTTTAAATT TTTAAAAGTT TATAAAGGTC TAGAAAACAA TATTGAATTA
GAAAAAATTG AAGAAGTTGA AATTTCTGAT TTAGGCGATA ATTTTATAAA GGATATAACA
CTATCTGATA TCTATGCATT TTTAGCTTTT TTAGAAAAAG TTAGAAACAA TAGTGCTTAT
GCCAGAGCTA GAAAAGTTGC TACTTTAAAA TCTTTCTTTA AGTTTTTAAA TTCTAAAATA
AAACTAATAG ATGAAAACCC TACAGTAGAA TTAGAATCTC CAAAGATAAA TAAAAGACAT
CCAGTTTATT TAACCTTAGA TCAAAGTATA ACTGTTTTAA ACTCTATGAA TAAATCAAAT
AAAAATTATT ATAGAGATTA TTGTATACTA ACTTTATTTT TAAACTGCGG AATGAGATTA
TCTGAACTTT GTAATATTGA AATAGAAAAA ATCAAAGGAG ATACCTTAAC TATTATAGGT
AAAGGAAATA AAGAAAGAAC TGTTTATTTA AATGAAGCTT CAATTGCAGC TATAGAAAAC
TATTTGAAAA ATAGAAATGA TTCAAAAGCT ACTGAAGAAG CTAAAAAATA CTTATTTTTA
TCAAGTAAAT ATAGGCCTAT AAACAAAAGA AGTGTTGAAA TTTTAGTGAA AAAACATATA
GAAAATGCAG GGTTTAAAGA TCAAAAATAT ACACCACATA AACTTAGACA CACAGCCGCC
ACCCTTATGT ATAAATACGG TAATGTAGAT ATAAGAAGCT TGCAAAATAT ATTAGGTCAC
GAAAATATTT CAACAACTCA AATATATACC CATGTAGATG ACGAAACTTT AAGAAAAGCA
GTTAAAACTA ATCCTTTAGC AAATATAAAA TAG
|
|---|
| Protein sequence | MNNEGNQFEN FKYSQENKEL LNINLSNDDL NNLDHIYNYY DSQNIQRDYE DLIEDIYIFV
FKRNLSITQL SEIYKVNQRI IKRWLKELGM DKLLEVEKST NSVEKSNFKN NKSDELLKKN
KLKFDFLEKS KHPKRVIEFL NYLENVKGKS LNTAKGYSVD LGLFFKFLKV YKGLENNIEL
EKIEEVEISD LGDNFIKDIT LSDIYAFLAF LEKVRNNSAY ARARKVATLK SFFKFLNSKI
KLIDENPTVE LESPKINKRH PVYLTLDQSI TVLNSMNKSN KNYYRDYCIL TLFLNCGMRL
SELCNIEIEK IKGDTLTIIG KGNKERTVYL NEASIAAIEN YLKNRNDSKA TEEAKKYLFL
SSKYRPINKR SVEILVKKHI ENAGFKDQKY TPHKLRHTAA TLMYKYGNVD IRSLQNILGH
ENISTTQIYT HVDDETLRKA VKTNPLANIK
|
|---|
| |