Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1156 |
Symbol | miaB |
ID | 4206388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1300515 |
End bp | 1301858 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565712 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_698478 |
Protein GI | 110803553 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.516492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTAG AAAATAACAT GGATAAAAAA CTCTTCTGTA TTTCTACATA CGGATGCCAA ATGAATGAAG AAGATTCAGA AAAATTATCA GGGATGTTAA AATCTCAAGG ATATGAAAGA ACTGAAAATA AAGAAGAGGC TTCTATTATA ATCTTTAATA CATGTTGTGT AAGAGAAAAT GCTGAAAATA AGGTTTTTGG TAATCTTGGA CAACTTAAGC AATTAAAAAA GAAAAATCCT AACTTAGTAA TAGCGATTTG TGGATGTATG ATGCAACAAG TAGGTATGGC AGATAAAGTC TTAAAAACTT TCCCTTATGT TGACATAATA TTTGGAACAC ATAATGCCCA TAAATTCCCT GAATATCTAC ATAGAGTACT TCAAGAAGGT GTTCAAGTTA AGGAAATATT AAATAAAGAA GAAGGAATTG TTGAAGGATT ACCTATAGAT AGAAAGAGTG ATGTTAAAGC ATTCGTTACT ATCATGTATG GATGTAACAA TTTCTGTACA TACTGTATAG TTCCTTATGT TAGAGGAAGA GAAAGAAGTA GAAAATCTGA GGATATCATA AAAGAAATAG AAGAATTAGT ATCTAAAGGA TATAAAGAAA TAACTTTATT AGGACAAAAC GTAAACTCAT ACGGAAAAGG CTTAGAAGAA GATATAGACT TTGCCGGTCT TTTAAGAAAA GTTAACGAAG TTAAGGGGTT AGAGAGAGTT AGATTTATGA CTTCTCATCC TAAAGATTTA AGTGATGATG TTATCATGGC TATAAAAGAA TGTGATAAGC TTTGTGAGCA AGTTCACTTA CCAGTTCAAA GTGGATCATC AAGAATATTA AAAGAGATGA ATAGACACTA TGACAGAGAG TATTACTTAG ATTTAGTTAA GAAAATAAAA TCAGAAATAC CAGATGTTAC TTTAACAACT GATATAATAA TTGGGTTCCC AGGAGAAACT GAAGAGGATT TCTTAGATAC ATTAAGTCTT TGTGAAGAAG TTGGATATGA TTCAGCATTT ACATTTATCT ATTCAAGAAG AAATCATACT CCTGCTGACA AAATGGAAAA TCAAATTCCA GATGACATAA AGCATGATAG ATTCAATAGA TTAGTTGAAG CTATCAATAA AAAGGTTGTA ATAAAAAATA AAGAATATGA AGGTAAGGTA GTTGAAGTTC TTGTTGAAGG ACCAAGTAAG AATGATGAAA CTAAATTAAC TGGAAGAACT AGAAATGGTA AATTAGTTAA CTTTGCTGGT GATGAAAAAC TAGTAGGTGA ATTAGTTAAC TTAAAAATAG TTAGAGCACA ACCATTCTCA TTAATTGGTG AAATAGTAGA ATAA
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Protein sequence | MTLENNMDKK LFCISTYGCQ MNEEDSEKLS GMLKSQGYER TENKEEASII IFNTCCVREN AENKVFGNLG QLKQLKKKNP NLVIAICGCM MQQVGMADKV LKTFPYVDII FGTHNAHKFP EYLHRVLQEG VQVKEILNKE EGIVEGLPID RKSDVKAFVT IMYGCNNFCT YCIVPYVRGR ERSRKSEDII KEIEELVSKG YKEITLLGQN VNSYGKGLEE DIDFAGLLRK VNEVKGLERV RFMTSHPKDL SDDVIMAIKE CDKLCEQVHL PVQSGSSRIL KEMNRHYDRE YYLDLVKKIK SEIPDVTLTT DIIIGFPGET EEDFLDTLSL CEEVGYDSAF TFIYSRRNHT PADKMENQIP DDIKHDRFNR LVEAINKKVV IKNKEYEGKV VEVLVEGPSK NDETKLTGRT RNGKLVNFAG DEKLVGELVN LKIVRAQPFS LIGEIVE
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