Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1142 |
Symbol | accC |
ID | 4205428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1287024 |
End bp | 1288376 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642565698 |
Product | biotin carboxylase |
Protein accession | YP_698464 |
Protein GI | 110802163 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.123284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA AGATATTAAT AGCAAATAGA GGTGAAATAG CTGTTAGAAT AATACGTGCT TGTAGAGAAT TAGGAATTCT TACTGTAGCT GTTTATTCTG AAATAGACAA AGATGCATTA CATGTGCAGT TAGCTGATGA AGCCGTTTGT ATAGGTCCAT GGAATTCTAG GGAAAGTTAC TTAAATATTC AAAATATATT AAGTGCTTGT GTTTTAACTG GAGCTGAAGC TATCCATCCT GGATTTGGTT TTTTATCTGA AAATCCAAGA TTTGCTAAGA TGTGTGAAGA GTGTAATATC GAGTTTATTG GCCCTAATTG GAGAGCTATA GAGCTTATGG GAAACAAAGC TATGGCAAGA GAAATAATGA AAAAGGCTGA TGTTCCTGTT GTACCTGGAT ATGAAGGTGA AATTGAAAGT CCAGAGTTTG CTTTAAAGAT AGCTAAAAAA ATAGGCTTCC CTGTAATAGT AAAGGCTTCC TCAGGTGGTG GTGGAAAAGG AATAAGAATA GTTTATAAAG AAGAAGATTT TATTTCAAAT TACAACACAG CTAAATCAGA GGCTCAAGCA AACTTTGGTG ATGATAAAAT TTACATTGAG AGATTTGTTG AAAATCCTAA ACATATAGAA GTACAATTAT TATGCGATAA GCATGGAAAT GCTCTTCACC TTTTTGAGCG AGATTGTTCA GCTCAAAGAA AAAATCAAAA AGTTTTAGAA GAAGCTCCCT CATCAATTTT AAGTGGTGAA CAAAGGGATA AACTTGGTAA GATTGCAGTT AAAGCAGCTA AAGCTGTAAA CTATAGCAAT GTTGGAACAA TTGAATTTTT ATTAGATAAA AATGGTGAAT TTTATTTTAT GGAAATGAAC ACAAGAATAC AAGTTGAACA TCCTATAACT GAAATGATAA CAGGTGTTGA TCTTGTTAAG GAACAAATAA AGGTTGCATT TGGTAAGGAG TTAGAAATAA CTCAAGATGA TTTAAAGATA AATGGTAATT CCATAGAATG CAGAATAAAT GCTGAAGATC CAAGCAAAAA CTTTATGCCA TGCCCTGGGT TAATAAAGGA AATTAATTTC CCAGGAGGAT TTGGAGTTCG TTTAGATACA GCAATTTATT CTGGATATAA GATACCTCAT TGTTATGATT CAATGATTGG TAAGCTAATA GTTCATGGTA AAGATAGAGA AGAGGCAATT TCTAAAATGA AAAGGGCTTT AGATGAATTT GCTATTGATG GTATAACAAC TAACATAGAC TATCACTTTT TAATATTGGA TCATGAAGAT TTTAAAAATG GTACTTATAA TACTTCATTT TTATCTGAAA AGTTGGTGAA TAAGTATGAT TAA
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Protein sequence | MFKKILIANR GEIAVRIIRA CRELGILTVA VYSEIDKDAL HVQLADEAVC IGPWNSRESY LNIQNILSAC VLTGAEAIHP GFGFLSENPR FAKMCEECNI EFIGPNWRAI ELMGNKAMAR EIMKKADVPV VPGYEGEIES PEFALKIAKK IGFPVIVKAS SGGGGKGIRI VYKEEDFISN YNTAKSEAQA NFGDDKIYIE RFVENPKHIE VQLLCDKHGN ALHLFERDCS AQRKNQKVLE EAPSSILSGE QRDKLGKIAV KAAKAVNYSN VGTIEFLLDK NGEFYFMEMN TRIQVEHPIT EMITGVDLVK EQIKVAFGKE LEITQDDLKI NGNSIECRIN AEDPSKNFMP CPGLIKEINF PGGFGVRLDT AIYSGYKIPH CYDSMIGKLI VHGKDREEAI SKMKRALDEF AIDGITTNID YHFLILDHED FKNGTYNTSF LSEKLVNKYD
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