Gene CPR_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1118 
Symbol 
ID4206032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp1262080 
End bp1262733 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content30% 
IMG OID642565674 
Producthypothetical protein 
Protein accessionYP_698440 
Protein GI110803898 
COG category[R] General function prediction only 
COG ID[COG2102] Predicted ATPases of PP-loop superfamily 
TIGRFAM ID[TIGR00290] MJ0570-related uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.391916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA AGTTTGTTGT ATCATATAGT TGTGGAAAGG ATAGTACATT ATCATTATAT 
AGAATGATAA AGGCTGGACA TACTCCAGTA GCTTTATTAG TCACTGTTGA TAAAAAAGTT 
TTAAGAAGTT GGTTCCATGG CATACCAGAT AAATTATTAA AAGACGTATC AAAATCTCTA 
GATATACCTC TAGTTTTAGT TGCAAGTAAC GGAAAAGAAA ATTATGGTGA AACATTTGTT 
GAAGCTTTAA AGAAAATTAA AGAAGAAATG GGTGCAGAAG CTTGTGTATT TGGAGATATT 
GATTTAATGG CTCATAGAAC TTGGTGTGAA GATAAATGTG AAAAAGCAGG ACTTGAAGCT 
ATTTTCCCAC TTTGGGAAGA AGATAGAGAA GCTCTAACTT ATGAGTTTAT AGATAGTGGC 
TTCAAAACTG TAATTAAAAA TGTAAAATTA AGCATTTTAG GAGAAGAATT CTTAGGTGAA 
GTTTTAACTA AGGATGTAGT TGAAAGATTA AAAGCAGCTG GTTCAGATGC TTGTGGAGAA 
AATGGAGAAT ATCATACATT TGTTTTTGAT GGACCTTTAT TTAAAGAAAG AATAAACTTT 
GAAACTGGAG ATAATATATT AACAGAAACT CATGGATTCT TAGATATTAA GTAG
 
Protein sequence
MKKKFVVSYS CGKDSTLSLY RMIKAGHTPV ALLVTVDKKV LRSWFHGIPD KLLKDVSKSL 
DIPLVLVASN GKENYGETFV EALKKIKEEM GAEACVFGDI DLMAHRTWCE DKCEKAGLEA 
IFPLWEEDRE ALTYEFIDSG FKTVIKNVKL SILGEEFLGE VLTKDVVERL KAAGSDACGE 
NGEYHTFVFD GPLFKERINF ETGDNILTET HGFLDIK