| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1114 |
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| Symbol | |
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| ID | 4206483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1257753 |
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| End bp | 1258817 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642565670 |
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| Product | threonine-phosphate decarboxylase |
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| Protein accession | YP_698436 |
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| Protein GI | 110803458 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.677622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTAG GACATGGTGG TAATGTAGAA GAAATTAAGA GGATTTATGG CTTAAAAGAA
AATGAAATTA TTGATTTTTC AGCTAATATA AACCCTATAG GAATCTCTGA AAGAGTAAAG
GAAGCTATGG TAAGAGGAAT AAATTCTATA GAGAGATATC CAGATATAAC TTATTATGAG
CTTAAAAAGG GGATTTCAAA CTTTGAAAAG GTAGCTTTAG AAAATATAGT TCTAGGAAAT
GGTGCGGCAG AGGTTATTTT TAATATAGTA AGAGGAATAA AACCTAAAAA GGCTCTTATA
GTATCACCAA CCTTTTCAGA GTATGAGGAT GCTTTAAATT CTGTTGAGTG TGAAGTTAAC
CATTATATAT TAAAAGATAA TTATTCAGTA GATAATGGAT TTTTAGAAGA AATCAAGGAA
GAATTAGATA TTATATTTTT ATGTAATCCC AATAATCCTA CAGGTGCTTT AATAGAAAAA
GATTTTTCAT TAAAAGTATT AGAAAAAGCA AAAAAAATGA ATATTACAGT TGTTTTTGAT
GAATCTTTTT TAGACTTTGT TGAAGATAAT TATAAATACT CTCTTATTAA AGAACTTGAT
AATTTCCAAA ATTTAATTGT AGTAAAATCT TTAACTAAAT TATTTGCCTT TCCTGGAATA
AGATTAGGTT ATGGATTAAG TTCTAATAAT AATTTTATAG AAAAAATAAA TTTAGTAGGA
ACTCCTTGGA GTGTAAATAC CGTAGCAGAC TATGCAGGAA GAGAAGCATT AAAAGATGTT
GAGTATATTA AAAACAGCGT AGCTTACATA AAAAAAGAAA ATGAATTTTT ATATAATGGC
CTAGAGAATT TTAAAGATAT TATTACTTTT AAAGGTGCAG TAAATTTTAT ATTTTTTAAA
TTGAATAAAA ATATAAATTT AAGAGAAGAA TTAATTAGAA GAGGTATAAT AATAAGAAGT
TGTAGTAATT ATATTGGCTT AGACCATAGC TTCTATAGAG TGGCAGTTAG AACAAGGGAA
GAAAACAAAA AGCTTTTAGA AGAACTTTCA AAGGTTTTAA AATAA
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| Protein sequence | MNLGHGGNVE EIKRIYGLKE NEIIDFSANI NPIGISERVK EAMVRGINSI ERYPDITYYE
LKKGISNFEK VALENIVLGN GAAEVIFNIV RGIKPKKALI VSPTFSEYED ALNSVECEVN
HYILKDNYSV DNGFLEEIKE ELDIIFLCNP NNPTGALIEK DFSLKVLEKA KKMNITVVFD
ESFLDFVEDN YKYSLIKELD NFQNLIVVKS LTKLFAFPGI RLGYGLSSNN NFIEKINLVG
TPWSVNTVAD YAGREALKDV EYIKNSVAYI KKENEFLYNG LENFKDIITF KGAVNFIFFK
LNKNINLREE LIRRGIIIRS CSNYIGLDHS FYRVAVRTRE ENKKLLEELS KVLK
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