Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1100 |
Symbol | |
ID | 4203997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1244524 |
End bp | 1245003 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 21% |
IMG OID | 642565656 |
Product | putative lipoprotein |
Protein accession | YP_698422 |
Protein GI | 110801725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00534188 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAATT TGATAAAAAA AATTACTAAA ATATTTTTAA TAACCCTATG TTTTTCTCTT CTTTTAATTT CATGTTCTAA AATTAATAGT TCTTCTAAAG AAAAACCTTC TTTAAACTAT CACACTAAAA ATTTAAGTGA ACTAGTTTCT AAGAATAATA TAAAAATCAG ATTATTAGAT ATGAATATTT ATAGTGAAGT AATTGTTGAT AATGAAGATA TAAGAATTAT TGATGACTTA TTAAAAAGCT TAAAAGATTC TAACTTTATA AATGAGGAAC CTTTACCTAA TAAACCTTTA TATAAAATTT TTATTGATTT AAACAGTGAA AAATATGTAA TAGATATTTA TGGCGATGAC TTAATAACTC TTTATCCTTG GGATAGTGAT GTAAGAAAGG ATTACTTAAG TTTAAAAGAC ATTCCTAATT CCTTTAAATT AGAACCATTT TGCCAGTATG TTTTTAATAA AAAACAATAA
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Protein sequence | MINLIKKITK IFLITLCFSL LLISCSKINS SSKEKPSLNY HTKNLSELVS KNNIKIRLLD MNIYSEVIVD NEDIRIIDDL LKSLKDSNFI NEEPLPNKPL YKIFIDLNSE KYVIDIYGDD LITLYPWDSD VRKDYLSLKD IPNSFKLEPF CQYVFNKKQ
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