Gene CPR_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1038 
Symbol 
ID4205746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1182859 
End bp1184313 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content30% 
IMG OID642565595 
ProductNa+/H+ antiporter, putative 
Protein accessionYP_698361 
Protein GI110802587 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.29524e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA CTATAAATTA TGATTCATTG TTAATCTTAT CTGTAGTAGC CTTTTTTACT 
CCCTTTTTAG TTTCAAGACT AAAAAGAGTA AATATCCCGT ATCAAGTAGG GGAAATATTT
ATAGGTATAT TATTAGGTAA AAGTTTTTTA AACATAATTA AACCAGATAT TTGGATTTTA
TTTTTATCAA ACTTAGGATT AGCTTATTTA ATGTTTTTAA GTGGTCTTGC TATAGACTTT
GATGAGCTTA AACCTAAGGA AGGAGAACTT TTAAAAGATT CTAAGTTATT TACTAGTATA
AAGATGTTTA TTGTATCTAT AATAACAGCT ATAATTTTAT CCTTTACATT AAAATTTGCA
GGTATTTCAG AAGGATATAT ATTCTTTGCA CTGCTATTTA CTGCCGCTGC CCCAGGATTA
CTTGTACCTA TTTTAAAAAC AAAACACATA ATAAATAGTA GTTATGGTCA AACTTTACTT
GTTTTTGGAA TAATAACTCA ATTAGTAAGT TTAATAGGTG TTACTTTTGT GGCTTCTGTT
GCAGTAAATG GTATTACCTT AAAGAGTTTT ACTTTCTTAA TAATATTTGC AGTGGCTATA
GTAGTATATT TCTTATCAAA GATTATATTT AAAGTTCATG ATTTTTCTAC TATTGCCTTT
AAAAACCTTC ACCTTAGCGT AAGAGGTGCC TTTGTTCTTG TTTTGGTACT TGTTGCTGTT
GCTGAAAAAG TAGACTCTGA GATAATTCTA GGCTCATTCT TAGCTGGTAT GGTATTTTCA
TTAATAGTTG GGAAAGCCAA AGAAGAAATT TCTCACCAAT TAGATGTGGT TGGGTATGGC
TTTTTAATTC CTATATTCTT TATAATGGTT GGAGTTAATG TTGATTTAAA GGCAGTTGTT
GAAAATCCTC AATCAATTGC TAAAATACCT TTGTTTATAC TAATTTTCTT CTTAGTAAAA
TTCATTCCAT CACTTTTACT TAAAAAGAAA TATGGAACGA GAAATTCCTT AGCAGCATCT
ATGTTATTAA CGGCACAGCT TAGTTTAGTT ATAGTTGGTT CTCAAATGGC ATTGAATTTA
GGATACATAA CTGCCGCAGA CTACTCTGCT TTCGTAGTTA CCACAGTAAT AACTTGTATC
TTCTTCCCAA TATTATTTGA AAAACTAATT GCACTTCATG GTGATACTAA TGATGCTGTA
GAAGAAGATG AAAAAATAAT AATACGTGAA GTACTTGTTA GTAGCCAATG GTATATAGGT
AAAGCCTTAA AGGATTGTAA GTTACCTACA GGATGTAGGA TTTTCTCAAT GGTAAGAGAT
GGCCATGAGT TTATGCCTAA TGCTAATACA ACTCTAGAAG AAAATGACTT AGTAATCCTT
GCCGGAGTTA AGCATGATGT AAATGAAACC ATTAATATGC TTTCAACCTG CGATTTAACT
TTACCAGAAG AATAA
 
Protein sequence
MNETINYDSL LILSVVAFFT PFLVSRLKRV NIPYQVGEIF IGILLGKSFL NIIKPDIWIL 
FLSNLGLAYL MFLSGLAIDF DELKPKEGEL LKDSKLFTSI KMFIVSIITA IILSFTLKFA
GISEGYIFFA LLFTAAAPGL LVPILKTKHI INSSYGQTLL VFGIITQLVS LIGVTFVASV
AVNGITLKSF TFLIIFAVAI VVYFLSKIIF KVHDFSTIAF KNLHLSVRGA FVLVLVLVAV
AEKVDSEIIL GSFLAGMVFS LIVGKAKEEI SHQLDVVGYG FLIPIFFIMV GVNVDLKAVV
ENPQSIAKIP LFILIFFLVK FIPSLLLKKK YGTRNSLAAS MLLTAQLSLV IVGSQMALNL
GYITAADYSA FVVTTVITCI FFPILFEKLI ALHGDTNDAV EEDEKIIIRE VLVSSQWYIG
KALKDCKLPT GCRIFSMVRD GHEFMPNANT TLEENDLVIL AGVKHDVNET INMLSTCDLT
LPEE