| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0935 |
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| Symbol | nagE |
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| ID | 4204639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1068685 |
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| End bp | 1070127 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642565493 |
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| Product | PTS system, N-acetylglucosamine-specific IIBC component |
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| Protein accession | YP_698259 |
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| Protein GI | 110802564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0848567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAT ATTTTCAGAA ATTAGGTAAA TCTTTAATGC TACCAGTTGC TGCGCTTCCA
GTAGCAGGTA TATTAATGGG AATTGGATAT TGGTTAGACC CATCTGGATG GGGTGCTAAT
AGTGTAGTAT CAGCATTCTT ATTAAAATCT GGTGGAGCTA TCATAGATAA CATGGCAATA
TTATTTGCTA TTGGGGTAGC TATTGGTATG TCAGATGATA ATGATGGAGC AGCAGGTTTA
GCAGGTCTAG TATCATGGCT TATGATAACT ACATTATTAT CTAGTGCAGT TGTTGCAATG
ATGCAAGGAG TAGAAGTAGA AGCTGTAAAC CCAGCTTTTG GAAAGATACA AAACCAATTT
ATAGGTATCG TAGCAGGTTT AATAGGAGCT GGTTGTTATA ATAGATTTAA AAACACTAAA
TTACCAGATT TCTTAGGATT CTTTAGTGGA AGAAGATGTG TTGCTATAGT AACAGCATTT
GCTTCAATAA TAGCCTCTTT AGTTTTATAC TTTGTATATC CTGTAATATA TAGCGCATTA
GTTTCATTTG GGGAATCAAT AATAGCTATG GGACCAATAG GAGCTGGTGT TTATGGATTC
TTCAATAGAT TATTAATACC TCTTGGTTTA CACCATGCTT TAAACTCAGT ATTCTGGTTT
GACGTTGCTG GTATAAATGA TATAGGAAAC TTCTGGGCTG GAACAGGTAC TTTAGGACAA
ACTGGTATGT ATATGTCAGG CTTCTTCCCA GTAATGATGT TTGGTTTACC TGCTGCTGCT
TTTGCGATGT ATCGTTGTGC AAAAACTAAT AAAAAGAAGG CTGCTGCTGG TATATTATTA
GCTGCTGCTT TATCATCATT CGTTACAGGA GTAACTGAAC CATTAGAATT TGCATTTATG
TTCTTAGCAC CTGCTTTATA TGTAGCTCAT GCTTTATTAA CAGGAATATC TATGGCAGTT
GTTGCTGCTT TACCAGTAAG AGCAGGATTT AACTTTAGTG CTGGTTTAGT AGATTGGATA
TTAAGTTTTG CATCACCAAT GGCATTAAAC CCATTATACT TATTAGGTAT AGGTTTAGTA
GTAGGAGTTA TATACTATGT AGTATTCGTA GTTATGATAA AGAAATTTGA CTTAAAGACT
CCAGGTAGAG AAGAAGATGA TGATGATTCA AATGCAGTTT TAGCAAATAA TAACTACACT
GAAGTTGCAA AAATAATCTT AGAAGGACTA GGTGGACCTT CTAACATTAC TTCAATTGAT
AACTGTATAA CTAGATTAAG ATTACAAGTA AAAGATAATA CATTAGTTGA TGAGAAAAAA
ATAAAATCAT CAGGTATTTC AGGAATTATA AGACCTGGAA AAACAAGTGT TCAAGTTATA
GTTGGAACAC AAGTACAGTT TGTAGCTGAC GAATTTAAGA AGCTTTGTAA GTCTAAAAAT
TAA
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| Protein sequence | MMKYFQKLGK SLMLPVAALP VAGILMGIGY WLDPSGWGAN SVVSAFLLKS GGAIIDNMAI
LFAIGVAIGM SDDNDGAAGL AGLVSWLMIT TLLSSAVVAM MQGVEVEAVN PAFGKIQNQF
IGIVAGLIGA GCYNRFKNTK LPDFLGFFSG RRCVAIVTAF ASIIASLVLY FVYPVIYSAL
VSFGESIIAM GPIGAGVYGF FNRLLIPLGL HHALNSVFWF DVAGINDIGN FWAGTGTLGQ
TGMYMSGFFP VMMFGLPAAA FAMYRCAKTN KKKAAAGILL AAALSSFVTG VTEPLEFAFM
FLAPALYVAH ALLTGISMAV VAALPVRAGF NFSAGLVDWI LSFASPMALN PLYLLGIGLV
VGVIYYVVFV VMIKKFDLKT PGREEDDDDS NAVLANNNYT EVAKIILEGL GGPSNITSID
NCITRLRLQV KDNTLVDEKK IKSSGISGII RPGKTSVQVI VGTQVQFVAD EFKKLCKSKN
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