Gene CPR_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0915 
Symbol 
ID4205530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp1046570 
End bp1047130 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content26% 
IMG OID642565473 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_698239 
Protein GI110803057 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00714947 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAG ATTACTATAT TTTTTCTAAT GGAAGGATTA AAAGAAAGGA AAATACTATT 
TACTTTGAAG ATTTTGAAGG TAATAAAAAA GGTTTACCAA TTGAAGATAT AGAAAGACTT 
CATATATTCG GAGAGGTTGA CTTAAATACA AAGTTTTTAA ATTATATATC AAGATACAGT 
GTTCTTATAA GTATATATAA CTATTATGGA TTTTATAGTG GATCATATTA CTCTAAGAAG 
AAAAATGTTT CTGGAGTATT ATTAGTAAAT CAAGCTTTAG CGTATGATAA CTATGAATTT 
AGGGTGGCTA TAGCAAAGAC TTTTATAGAT TCTGCTATGC ATCATATATT AAGAAATCTT 
AGAAGATATA AAGAGAAAAC ATCTGAATTT GTAAAAGCAA TAGAAAATGA AAGAAAGATT 
ATGAAGGAAG CAAAAACAAT TGAAGAGGTT ATGGGAGCTG AAGGTAGAGC AAGAAAAAAA 
TATTATGAAT CATATAATGC TTTCTTAAAA ATGATTTTCA TTTTAATAAA AGAGAGAAAA 
AACCACCTAA CGATCCCATA A
 
Protein sequence
MGRDYYIFSN GRIKRKENTI YFEDFEGNKK GLPIEDIERL HIFGEVDLNT KFLNYISRYS 
VLISIYNYYG FYSGSYYSKK KNVSGVLLVN QALAYDNYEF RVAIAKTFID SAMHHILRNL 
RRYKEKTSEF VKAIENERKI MKEAKTIEEV MGAEGRARKK YYESYNAFLK MIFILIKERK 
NHLTIP