Gene CPR_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0883 
Symbol 
ID4205272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1018366 
End bp1018863 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content26% 
IMG OID642565442 
Producthypothetical protein 
Protein accessionYP_698208 
Protein GI110802085 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0253557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG TTAAATTTAA TAAACTTCCT TTAGTTTATC CTATACCATC AGTATTAATA 
GGAACAATTA TAAATGATAA ACCTAATTTT GCAACTATAG GAAACTGCGG AATAATAAGC
GTTAACCCTG CTGTTATCTA TATATCAATG GAAAAGAATC ATTATACAAA TAAAGGCATA
AGAGAAAATC AAGTGTTTAG TATTAATATA CCTTCAGCAG ATTTAGTTGA AAAAGTTGAT
TATTGCGGGC TTGTTTCAGA AAATAACATT GATAAATCAC AAATTTTTAA GTGTTTTTAT
GAAAGTAATG ATAAAATTCC ACTGATTGAG GAATGTCCAA TAAATATGGA ATGTAAAGTA
ACAAAGATAA TTGAAATTTA TGATATGGAA TTATTTATTG GTGAAATAAT AGAAACTTAT
GTTAACCAAA GACTTACTTA CAAATGGTTT TCCAGATACA AAGAAGATAA ATCCACTTAT
TTACTCTATG GACAATAA
 
Protein sequence
MSKVKFNKLP LVYPIPSVLI GTIINDKPNF ATIGNCGIIS VNPAVIYISM EKNHYTNKGI 
RENQVFSINI PSADLVEKVD YCGLVSENNI DKSQIFKCFY ESNDKIPLIE ECPINMECKV
TKIIEIYDME LFIGEIIETY VNQRLTYKWF SRYKEDKSTY LLYGQ