Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0879 |
Symbol | |
ID | 4204682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1016155 |
End bp | 1016976 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565438 |
Product | CAAX amino terminal protease family protein |
Protein accession | YP_698204 |
Protein GI | 110802295 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00516556 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TCATTAAACT ATTTCAAGCC ATACTAAACA TATTTATTTT TCTAGCCCTA TATTACATTC TATCCTTTAT AGGATCTCTT TTATTTTTAT TATTCTGCTG CTTTATAACA AAGACACCCT TAAGACTATT ACCACCTAAT TTTATTGATT CAAATTTCTT TATGATTGAT GGATTTGCTT GTTTTTTAAC CATGTTAGTT TATCTTCTTA TATATAAATT AAAGAAATAC AACAAAAATA GATATATTAA TAAACTTCCA AGAAAAGATA TTCCTAAATA CGCCTTAATT TCAATTGGTA TGGGAGGCCT CTCTGCTCTA TGGCTAATAT TTGCAGACAA AATCTTATCC TCTATTACCC TTGTAAAAAA TAGCTTGCAA AATTTTTCTC AAATATCTGA AAGCTTAAAT AATGAAGCCT ATATATTTAT ATTTTTATCT GTAATTTTAT TTGGCCCAGT TGTTGAAGAA TTACTTTTTA GAGGATTAAT CTTTAACGAA ATAGATAAGA TAAAAGGAGG AGCAACCCCT ATAATTCTCT CTAGTCTTTT ATTTGGATTA TTCCATAGAG AACCTGTCCA AGTTGTTTAT TCCTCTATAT TAGGAATTAT TTTAGGATTT GTATATAGTA AAACTCGTTC TCTTCCTTTA GTTATATTCA TGCATATGCT AAATAACCTA GTTGCAACCC TTCCCCCTCC ACTAGCTAAG CATGAAATAC TCCAGTTTGT TAATGGCTTT CAAATAATAA GCATAATTCC AATGGCCTAT CTATTATACA AGCTACACAA AAAAGGCTCT TTAACAAGCT AA
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Protein sequence | MKKIIKLFQA ILNIFIFLAL YYILSFIGSL LFLLFCCFIT KTPLRLLPPN FIDSNFFMID GFACFLTMLV YLLIYKLKKY NKNRYINKLP RKDIPKYALI SIGMGGLSAL WLIFADKILS SITLVKNSLQ NFSQISESLN NEAYIFIFLS VILFGPVVEE LLFRGLIFNE IDKIKGGATP IILSSLLFGL FHREPVQVVY SSILGIILGF VYSKTRSLPL VIFMHMLNNL VATLPPPLAK HEILQFVNGF QIISIIPMAY LLYKLHKKGS LTS
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