| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0858 |
|---|
| Symbol | |
|---|
| ID | 4204991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 997729 |
|---|
| End bp | 998268 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642565417 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_698183 |
|---|
| Protein GI | 110803143 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3153] Predicted acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000408067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA TTGTTAGAAA AGAGTTAGAA GAAGACCATA AAACAGTAGA GCTTTTAGTA
GAAGAAGCCT TTAAAGATGC TGAGTACAGT GATCATATGG AACATGTTTT AGTTAGTAAA
CTTAGAAAGG GAGAAAACTT TATTGATGGC TTATCTTTAG TTGCTGAAAG AGAGGGAGAA
ATAGTAGGAC ACATATTATT AACTAAAGCT AATATAGAAA ATGAAACAGA AAAATATGAA
ACTTTAGCCT TAGCACCAGT TTCAGTATTA CCTAAATATC AAGGTATTGG AATTGGAGGA
GAGCTTATAA GAGAAGGAAT GAGAATGGCT AAGGAACTTG GATATGATTC AATAATAGTT
TTAGGACATG ATAAATACTA TCCTAAATTT GGATTTAAAA AAGCTGGAGA TTTTGAAATA
AGAGCTCCTT TTGAAGTGCC AGAAGAAAAC TTTATGGCAA TAGAATTAAA TGAAGAAGCT
TTAAAAAATA TAAGTGGTGT TGTAAGATAT GCCAATGAAT TTTTAGCAGA TAATAAGTAA
|
|---|
| Protein sequence | MKVIVRKELE EDHKTVELLV EEAFKDAEYS DHMEHVLVSK LRKGENFIDG LSLVAEREGE
IVGHILLTKA NIENETEKYE TLALAPVSVL PKYQGIGIGG ELIREGMRMA KELGYDSIIV
LGHDKYYPKF GFKKAGDFEI RAPFEVPEEN FMAIELNEEA LKNISGVVRY ANEFLADNK
|
|---|
| |