Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0852 |
Symbol | alr |
ID | 4205106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 990163 |
End bp | 991323 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565411 |
Product | alanine racemase |
Protein accession | YP_698177 |
Protein GI | 110802018 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAT GTGTTAGACC TGTATGGGCT GAAATAGATT TAGATATAAT AGCAAATAAT ATGAAAGAAA TAAGAAACCT AGTTGGTGAA AAGGAAATAA TAGCCGTTGT TAAGGCTAAT GCTTATGGAC ATGGAGCTTT AGACATAGCT TCCACTCTTT TAGAAAATGG TGCTTCTAGA TTAGCAGTAG CTATAATCAC AGAGGCTGAT GAACTTAGGG ATGCTGGAAT AACTGCACCT ATTATGATTT TAGGCTATAC TCCTATAAAT TTCGCTGAAA ATTTAATCAA TAATGAAATT GAACAAACAG TTTATGATGT GGAATATGCT AAGGAATTAT CTGACTTTGC CTTAAAACTT GGCAAAAAAG CTAAAATACA CATTGCAATA GATACAGGAA TGGGTAGAAT AGGTTTCCTT CCAAATGAAG AGGGATTAAA TAAAGTTTTA GAAATATGCT CTTTACCTGG AGTTGAGGTA GTAGGCTTAT TTACTCACTT CTCAACATCA GATGAAAAAG ATAAAACTTA TACTTATGAA CAATTTTCAA AATTAACTAA TTTTAATAAA GCTTTAGAAG ACAATGGAAT ACACATTCCT TTAAAACATG CTTCTAATAG TGGGGCTATT ATGGATTTAC CAGAAACCTA TTTAGACGGA GTTAGATGTG GAATTATTTC TTATGGATAC TATCCATCTG AAGAAGTAAA AAAAGAAAAC TTAAAACTTA AACCAGCACT TACATTAAAA ACTAATGTAG CCTTTGTTAA AGAGTTAGAT GAAGATATGT ATGTAAGCTA CGGAAGAACT TATAAAACTG AAAAGAAAAG TAAAATTGCC ACTCTTCCAA TAGGATATGC TGATGGATAC TCAAGACTTC TTAGTGGAAA AGCCAAAGTT ATAATAAAGG GTCAATTTGC TAATGTTATA GGAAGAGTTT GTATGGATCA ATGTATGGTT GATGTAACTC ATATAGAAGA TGTTAAAATT GGTGATGAAG TAATTCTTTT AGGGGAAGAA AATGGATTAA AATTTGATGC TAATGATATG GCTGAAATTA TGGGAACAAT AAACTACGAA ATACTTTGTA TGATTAGCCA TAGAGTTCCT AGAATATATA AAAAGAATAA TGAAATAGTT AAGGTAAGAA ACTATATTTA A
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Protein sequence | MDICVRPVWA EIDLDIIANN MKEIRNLVGE KEIIAVVKAN AYGHGALDIA STLLENGASR LAVAIITEAD ELRDAGITAP IMILGYTPIN FAENLINNEI EQTVYDVEYA KELSDFALKL GKKAKIHIAI DTGMGRIGFL PNEEGLNKVL EICSLPGVEV VGLFTHFSTS DEKDKTYTYE QFSKLTNFNK ALEDNGIHIP LKHASNSGAI MDLPETYLDG VRCGIISYGY YPSEEVKKEN LKLKPALTLK TNVAFVKELD EDMYVSYGRT YKTEKKSKIA TLPIGYADGY SRLLSGKAKV IIKGQFANVI GRVCMDQCMV DVTHIEDVKI GDEVILLGEE NGLKFDANDM AEIMGTINYE ILCMISHRVP RIYKKNNEIV KVRNYI
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