Gene CPR_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0852 
Symbolalr 
ID4205106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp990163 
End bp991323 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content31% 
IMG OID642565411 
Productalanine racemase 
Protein accessionYP_698177 
Protein GI110802018 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAT GTGTTAGACC TGTATGGGCT GAAATAGATT TAGATATAAT AGCAAATAAT 
ATGAAAGAAA TAAGAAACCT AGTTGGTGAA AAGGAAATAA TAGCCGTTGT TAAGGCTAAT
GCTTATGGAC ATGGAGCTTT AGACATAGCT TCCACTCTTT TAGAAAATGG TGCTTCTAGA
TTAGCAGTAG CTATAATCAC AGAGGCTGAT GAACTTAGGG ATGCTGGAAT AACTGCACCT
ATTATGATTT TAGGCTATAC TCCTATAAAT TTCGCTGAAA ATTTAATCAA TAATGAAATT
GAACAAACAG TTTATGATGT GGAATATGCT AAGGAATTAT CTGACTTTGC CTTAAAACTT
GGCAAAAAAG CTAAAATACA CATTGCAATA GATACAGGAA TGGGTAGAAT AGGTTTCCTT
CCAAATGAAG AGGGATTAAA TAAAGTTTTA GAAATATGCT CTTTACCTGG AGTTGAGGTA
GTAGGCTTAT TTACTCACTT CTCAACATCA GATGAAAAAG ATAAAACTTA TACTTATGAA
CAATTTTCAA AATTAACTAA TTTTAATAAA GCTTTAGAAG ACAATGGAAT ACACATTCCT
TTAAAACATG CTTCTAATAG TGGGGCTATT ATGGATTTAC CAGAAACCTA TTTAGACGGA
GTTAGATGTG GAATTATTTC TTATGGATAC TATCCATCTG AAGAAGTAAA AAAAGAAAAC
TTAAAACTTA AACCAGCACT TACATTAAAA ACTAATGTAG CCTTTGTTAA AGAGTTAGAT
GAAGATATGT ATGTAAGCTA CGGAAGAACT TATAAAACTG AAAAGAAAAG TAAAATTGCC
ACTCTTCCAA TAGGATATGC TGATGGATAC TCAAGACTTC TTAGTGGAAA AGCCAAAGTT
ATAATAAAGG GTCAATTTGC TAATGTTATA GGAAGAGTTT GTATGGATCA ATGTATGGTT
GATGTAACTC ATATAGAAGA TGTTAAAATT GGTGATGAAG TAATTCTTTT AGGGGAAGAA
AATGGATTAA AATTTGATGC TAATGATATG GCTGAAATTA TGGGAACAAT AAACTACGAA
ATACTTTGTA TGATTAGCCA TAGAGTTCCT AGAATATATA AAAAGAATAA TGAAATAGTT
AAGGTAAGAA ACTATATTTA A
 
Protein sequence
MDICVRPVWA EIDLDIIANN MKEIRNLVGE KEIIAVVKAN AYGHGALDIA STLLENGASR 
LAVAIITEAD ELRDAGITAP IMILGYTPIN FAENLINNEI EQTVYDVEYA KELSDFALKL
GKKAKIHIAI DTGMGRIGFL PNEEGLNKVL EICSLPGVEV VGLFTHFSTS DEKDKTYTYE
QFSKLTNFNK ALEDNGIHIP LKHASNSGAI MDLPETYLDG VRCGIISYGY YPSEEVKKEN
LKLKPALTLK TNVAFVKELD EDMYVSYGRT YKTEKKSKIA TLPIGYADGY SRLLSGKAKV
IIKGQFANVI GRVCMDQCMV DVTHIEDVKI GDEVILLGEE NGLKFDANDM AEIMGTINYE
ILCMISHRVP RIYKKNNEIV KVRNYI