Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0845 |
Symbol | |
ID | 4206539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 976605 |
End bp | 977864 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642565404 |
Product | GntP family permease |
Protein accession | YP_698170 |
Protein GI | 110801847 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00379452 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGTAA CAGTTACAGC TTTAGGTGCA GTAATTGCAT TAGTTATTGC AATCACTCTT ATCATAAAAA AGGTTCATCC AGCATACGGA CTTATATTAG GAGCTTTAAT AGGTGGACTT GTTGGTGGAG CAGGACTAAC AGGGACAGTT AATTTAATGA TGGATGGAGC CAAAAATATG ATGCCTGCTA TCCTTAGAAT ACTTACAGCA GGGGTACTAG CTGGGGTATT AATTGAATCC GGAGCGGCAG CGAAGATTGC AGAGACAATA GTTGAGAAGA TTGGAGAATC AAGAGCTCTT ATAGCCTTAG CAATAGCTAC TATGGTTTTA ACAATGGTTG GAGTTTTTGT AGACGTTTCA GTAATAACAG TATCTCCAAT AGCTTTAGCA ATAGCTCACA AATCAGGTTT AAGTAAACCA GCTATATTAT TAGCCATGGT TGGTGGAGGT AAGGCAGGAA ATATAATGTC TCCAAACCCA AATACAATTG CGGCAGCAGA TAATTTAGGA GTTTCATTAA CTAATGTTAT GATAGCAGGT ATAGTACCAG CTATATTTGG AGTTATAATT ACATGTATAT TAGCAAGTAG AATAAAACAA AAAGGTTCTT TAGTAGAATC TGATGAACAT ATGAAAGAGT TAATAGATAT GCCTGGATTT TTACCAGCCA TGGTTGGACC ATTAGTAGCA ATAATCTTAT TAATGTTAAG ACCAATAGCA GGCATTGCTA TAGATCCATT AATAGCTTTA CCAGTAGGTG GTATATGCGG AATACTAGCT ATGGGAAAAA TTAAGCATAT TAACAAATAT GCAACATATG GACTAGCTAA GATGAGTGGA GTAGCTATAC TTTTAATAGG TACAGGTACT TTAGCGGGAA TAATTGCTAA CTCAGGATTA AAGGATGTTA TTATAAGTGG AATAAACGCT TTAGGCTTAC CAAGCTTTAT GTTAGCTCCA GTTTCAGGAA TACTTATGTC AGCGGCAACT GCTTCTACTA CTTCAGGAAC AGCGGTGGCT ACATCAGTCT TTGGACCAAC AATTGTTCAA TTAGGAGTGG CACCACTTGC TACAGCAGCT ATGATACATG CTGGGGCTAC AGTTTTAGAT CACTTACCTC ATGGAAGCTT CTTCCACGCT ACTGGTGGAA GCGTTTCAAT GGATATGAAA GAGAGACTTA AACTTATACC ATATGAATCT TTAGTTGGAT TAACAATGAC AATTGTATCA ACTATAATAT TTGGAATAAT ATTAAAATAG
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Protein sequence | MNVTVTALGA VIALVIAITL IIKKVHPAYG LILGALIGGL VGGAGLTGTV NLMMDGAKNM MPAILRILTA GVLAGVLIES GAAAKIAETI VEKIGESRAL IALAIATMVL TMVGVFVDVS VITVSPIALA IAHKSGLSKP AILLAMVGGG KAGNIMSPNP NTIAAADNLG VSLTNVMIAG IVPAIFGVII TCILASRIKQ KGSLVESDEH MKELIDMPGF LPAMVGPLVA IILLMLRPIA GIAIDPLIAL PVGGICGILA MGKIKHINKY ATYGLAKMSG VAILLIGTGT LAGIIANSGL KDVIISGINA LGLPSFMLAP VSGILMSAAT ASTTSGTAVA TSVFGPTIVQ LGVAPLATAA MIHAGATVLD HLPHGSFFHA TGGSVSMDMK ERLKLIPYES LVGLTMTIVS TIIFGIILK
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