Gene CPR_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0845 
Symbol 
ID4206539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp976605 
End bp977864 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content37% 
IMG OID642565404 
ProductGntP family permease 
Protein accessionYP_698170 
Protein GI110801847 
COG category[G] Carbohydrate transport and metabolism
[E] Amino acid transport and metabolism 
COG ID[COG2610] H+/gluconate symporter and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00379452 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGTAA CAGTTACAGC TTTAGGTGCA GTAATTGCAT TAGTTATTGC AATCACTCTT 
ATCATAAAAA AGGTTCATCC AGCATACGGA CTTATATTAG GAGCTTTAAT AGGTGGACTT
GTTGGTGGAG CAGGACTAAC AGGGACAGTT AATTTAATGA TGGATGGAGC CAAAAATATG
ATGCCTGCTA TCCTTAGAAT ACTTACAGCA GGGGTACTAG CTGGGGTATT AATTGAATCC
GGAGCGGCAG CGAAGATTGC AGAGACAATA GTTGAGAAGA TTGGAGAATC AAGAGCTCTT
ATAGCCTTAG CAATAGCTAC TATGGTTTTA ACAATGGTTG GAGTTTTTGT AGACGTTTCA
GTAATAACAG TATCTCCAAT AGCTTTAGCA ATAGCTCACA AATCAGGTTT AAGTAAACCA
GCTATATTAT TAGCCATGGT TGGTGGAGGT AAGGCAGGAA ATATAATGTC TCCAAACCCA
AATACAATTG CGGCAGCAGA TAATTTAGGA GTTTCATTAA CTAATGTTAT GATAGCAGGT
ATAGTACCAG CTATATTTGG AGTTATAATT ACATGTATAT TAGCAAGTAG AATAAAACAA
AAAGGTTCTT TAGTAGAATC TGATGAACAT ATGAAAGAGT TAATAGATAT GCCTGGATTT
TTACCAGCCA TGGTTGGACC ATTAGTAGCA ATAATCTTAT TAATGTTAAG ACCAATAGCA
GGCATTGCTA TAGATCCATT AATAGCTTTA CCAGTAGGTG GTATATGCGG AATACTAGCT
ATGGGAAAAA TTAAGCATAT TAACAAATAT GCAACATATG GACTAGCTAA GATGAGTGGA
GTAGCTATAC TTTTAATAGG TACAGGTACT TTAGCGGGAA TAATTGCTAA CTCAGGATTA
AAGGATGTTA TTATAAGTGG AATAAACGCT TTAGGCTTAC CAAGCTTTAT GTTAGCTCCA
GTTTCAGGAA TACTTATGTC AGCGGCAACT GCTTCTACTA CTTCAGGAAC AGCGGTGGCT
ACATCAGTCT TTGGACCAAC AATTGTTCAA TTAGGAGTGG CACCACTTGC TACAGCAGCT
ATGATACATG CTGGGGCTAC AGTTTTAGAT CACTTACCTC ATGGAAGCTT CTTCCACGCT
ACTGGTGGAA GCGTTTCAAT GGATATGAAA GAGAGACTTA AACTTATACC ATATGAATCT
TTAGTTGGAT TAACAATGAC AATTGTATCA ACTATAATAT TTGGAATAAT ATTAAAATAG
 
Protein sequence
MNVTVTALGA VIALVIAITL IIKKVHPAYG LILGALIGGL VGGAGLTGTV NLMMDGAKNM 
MPAILRILTA GVLAGVLIES GAAAKIAETI VEKIGESRAL IALAIATMVL TMVGVFVDVS
VITVSPIALA IAHKSGLSKP AILLAMVGGG KAGNIMSPNP NTIAAADNLG VSLTNVMIAG
IVPAIFGVII TCILASRIKQ KGSLVESDEH MKELIDMPGF LPAMVGPLVA IILLMLRPIA
GIAIDPLIAL PVGGICGILA MGKIKHINKY ATYGLAKMSG VAILLIGTGT LAGIIANSGL
KDVIISGINA LGLPSFMLAP VSGILMSAAT ASTTSGTAVA TSVFGPTIVQ LGVAPLATAA
MIHAGATVLD HLPHGSFFHA TGGSVSMDMK ERLKLIPYES LVGLTMTIVS TIIFGIILK