Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0804 |
Symbol | |
ID | 4205472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 929751 |
End bp | 930731 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642565363 |
Product | PTS system mannose/fructose/sorbose family IIAB subunit |
Protein accession | YP_698129 |
Protein GI | 110802187 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGGAA TTATTCTTGC TAGTCACGGA GAATTTGCTA AAGGAATATT ACAATCTGGC TCAATGATTT TTGGAGAACA GGAAAATGTA AAAGCTGTTA CATTGATGCC TAGCGAAGGA CCAGATGATA TTAAAGCAAA GATGAAAGAA GCAATTGCTT CCTTTGATAA TCAAGATGAG GTTTTATTCT TAGTTGACCT ATGGGGTGGA ACACCATTTA ATCAAGCAAA CAGCCTAGTA GAAGAACATG CAGATAAATG GGCAATCGTA GCTGGAATGA ATTTACCGAT GGTTATTGAA GCTTATGCTT CACGTTTTTC AATGGAATCA GCACAAGAAA TTGCTGTTAA TATTCTAAAG TCAGCTAGAG ATGGAGTTAA AGTTAAGCCA GAATCATTAG AACCAGAAGA GGATACTAAA ACAAATACAG ATTCTGCACA ACAATCTAAT AATGTAGGTG CACCTGGCTC TTTTGAATAC GTTTTGGCAC GTATTGATTC ACGTTTACTT CATGGTCAAG TAGCTACTGC TTGGACAAAA ACTGTAAAAC CAACAAGAAT TATTGTTGTA TCAGACGATG TAGCTAAAGA TGAACTTCGT AAGAAATTGA TTCAACAAGC AGCTCCTCCT GGAGTTAAAG CACATACTGT TCCAGTTAGC CAAATGATTA AGCTTGCAAA AGATGACCAA CACTTTGGAG GACAACGTGC GTTACTTCTT TTTGAAAATC CAGAAGATGT ACTAAGAGCA GTAGAGGGAG GAGTACCTAT AAAGACAGTT AATGTTGGTT CTATGGCTCA CTCTCCTGGA AAGGTTCAAC CAAATAAAGT ACTTGCTTTC GATCAAGAAG ATATTGATAC TTTTAAGAAG CTTAAAGAAG CTGGATTGGA TTTCGATGTT CGTAAAGTTC CAAATGATAC AAAAGGAAAT ATGGACGAAA TTCTTAAAAA GGCACAAGAG GAATTAAATA AATTAAAGTA A
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Protein sequence | MVGIILASHG EFAKGILQSG SMIFGEQENV KAVTLMPSEG PDDIKAKMKE AIASFDNQDE VLFLVDLWGG TPFNQANSLV EEHADKWAIV AGMNLPMVIE AYASRFSMES AQEIAVNILK SARDGVKVKP ESLEPEEDTK TNTDSAQQSN NVGAPGSFEY VLARIDSRLL HGQVATAWTK TVKPTRIIVV SDDVAKDELR KKLIQQAAPP GVKAHTVPVS QMIKLAKDDQ HFGGQRALLL FENPEDVLRA VEGGVPIKTV NVGSMAHSPG KVQPNKVLAF DQEDIDTFKK LKEAGLDFDV RKVPNDTKGN MDEILKKAQE ELNKLK
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