Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0796 |
Symbol | |
ID | 4205027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 922862 |
End bp | 923875 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565355 |
Product | ferrichrome transport system, permease protein |
Protein accession | YP_698121 |
Protein GI | 110801997 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | [TIGR01495] Plasmodium ring stage membrane protein ETRAMP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.228796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATAA AAAAGAACCA TAAATTTATA TGGGTAACGG GAATTTTAAT AGGTTTAATT TTTATTACCT TCTTAATAAG TTTAAACATG GGTTCACTTT CAATTGAGCC AGGAGAAGTT ATTAAAACTT TAATTGGACA AGGTACAAAA AGTAATGAAA TAGCTATATT TAAGCTTAGA TTTCCTAGAA TAGTCATAGG AATATTAGTA GGAACAGCTT TAGCAACTGC AGGTACAATC CTGCAAGGGG TTACTAAAAA TGATTTAGCT GATTCAGGAA TACTTGGAAT AAATTCAGGA GCGGCCTTAT TTGTTGTAGT TTATATATAT ATAATGAATG GAAATGTATA TGATGGTGTA AGTAATTTAA CTATTTTTAC TATGCCTATA GTAGCTTTAA GTGGAGCTAT ATTTGGAGCA TTTTTAATAT ACATATTAGC ATGGAAGAAT GGAATAAATT CATCAAGACT ATTATTAATA GGTATAGGTA TAAATATAGC TTTTACCTCC TTATTAACAA TATTTCAGTT AAGATTTACT ACTCAAGAAT TTAATAGAGT TATGGCTTGG ATATCAGGAA GCATATGGGG AGCAAGTTGG AAATATGTAT TAGCAATATT ACCATTTATA ATTATATTTA TGGCTTTAAC TATATATAAA TCAAGATATT TAGATGGATT AAATTTAGGA GACGAAGTTG CCACAGGTAT AGGGATTGAA GTAGAAAAAG AAAGAAGAAA ACTAATTATA TATGCAGTTA TATTAGCAGG GGTAGCTACA TCAGTTGCAG GTAGCATAGG TTTCCTAGGT TTAGTATCTC CTCATATAGC AAGAAAATTA ATAGGGCCAA AGCATAAGAA ATTAATTCCT GTAGCAGCCC TTATTGGAAG TTTAATATTA TTAGTGTCAG ATACTATAGC AAGAAATTTA ATTGCACCAA TGGAAATGCC AGTAGGTATA ATCGTATCTA TAATAGGAGT TCCATATTTT ATTTATTTAA TGTTATCAAA ATAG
|
Protein sequence | MNIKKNHKFI WVTGILIGLI FITFLISLNM GSLSIEPGEV IKTLIGQGTK SNEIAIFKLR FPRIVIGILV GTALATAGTI LQGVTKNDLA DSGILGINSG AALFVVVYIY IMNGNVYDGV SNLTIFTMPI VALSGAIFGA FLIYILAWKN GINSSRLLLI GIGINIAFTS LLTIFQLRFT TQEFNRVMAW ISGSIWGASW KYVLAILPFI IIFMALTIYK SRYLDGLNLG DEVATGIGIE VEKERRKLII YAVILAGVAT SVAGSIGFLG LVSPHIARKL IGPKHKKLIP VAALIGSLIL LVSDTIARNL IAPMEMPVGI IVSIIGVPYF IYLMLSK
|
| |