Gene CPR_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0796 
Symbol 
ID4205027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp922862 
End bp923875 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content29% 
IMG OID642565355 
Productferrichrome transport system, permease protein 
Protein accessionYP_698121 
Protein GI110801997 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID[TIGR01495] Plasmodium ring stage membrane protein ETRAMP 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.228796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA AAAAGAACCA TAAATTTATA TGGGTAACGG GAATTTTAAT AGGTTTAATT 
TTTATTACCT TCTTAATAAG TTTAAACATG GGTTCACTTT CAATTGAGCC AGGAGAAGTT
ATTAAAACTT TAATTGGACA AGGTACAAAA AGTAATGAAA TAGCTATATT TAAGCTTAGA
TTTCCTAGAA TAGTCATAGG AATATTAGTA GGAACAGCTT TAGCAACTGC AGGTACAATC
CTGCAAGGGG TTACTAAAAA TGATTTAGCT GATTCAGGAA TACTTGGAAT AAATTCAGGA
GCGGCCTTAT TTGTTGTAGT TTATATATAT ATAATGAATG GAAATGTATA TGATGGTGTA
AGTAATTTAA CTATTTTTAC TATGCCTATA GTAGCTTTAA GTGGAGCTAT ATTTGGAGCA
TTTTTAATAT ACATATTAGC ATGGAAGAAT GGAATAAATT CATCAAGACT ATTATTAATA
GGTATAGGTA TAAATATAGC TTTTACCTCC TTATTAACAA TATTTCAGTT AAGATTTACT
ACTCAAGAAT TTAATAGAGT TATGGCTTGG ATATCAGGAA GCATATGGGG AGCAAGTTGG
AAATATGTAT TAGCAATATT ACCATTTATA ATTATATTTA TGGCTTTAAC TATATATAAA
TCAAGATATT TAGATGGATT AAATTTAGGA GACGAAGTTG CCACAGGTAT AGGGATTGAA
GTAGAAAAAG AAAGAAGAAA ACTAATTATA TATGCAGTTA TATTAGCAGG GGTAGCTACA
TCAGTTGCAG GTAGCATAGG TTTCCTAGGT TTAGTATCTC CTCATATAGC AAGAAAATTA
ATAGGGCCAA AGCATAAGAA ATTAATTCCT GTAGCAGCCC TTATTGGAAG TTTAATATTA
TTAGTGTCAG ATACTATAGC AAGAAATTTA ATTGCACCAA TGGAAATGCC AGTAGGTATA
ATCGTATCTA TAATAGGAGT TCCATATTTT ATTTATTTAA TGTTATCAAA ATAG
 
Protein sequence
MNIKKNHKFI WVTGILIGLI FITFLISLNM GSLSIEPGEV IKTLIGQGTK SNEIAIFKLR 
FPRIVIGILV GTALATAGTI LQGVTKNDLA DSGILGINSG AALFVVVYIY IMNGNVYDGV
SNLTIFTMPI VALSGAIFGA FLIYILAWKN GINSSRLLLI GIGINIAFTS LLTIFQLRFT
TQEFNRVMAW ISGSIWGASW KYVLAILPFI IIFMALTIYK SRYLDGLNLG DEVATGIGIE
VEKERRKLII YAVILAGVAT SVAGSIGFLG LVSPHIARKL IGPKHKKLIP VAALIGSLIL
LVSDTIARNL IAPMEMPVGI IVSIIGVPYF IYLMLSK