Gene CPR_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0781 
Symbol 
ID4205353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp906141 
End bp906917 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content27% 
IMG OID642565340 
Productiron(III) dicitrate transport permease-like protein yusV 
Protein accessionYP_698106 
Protein GI110803018 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.215395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA TAAAAACAAA TAATTTGAAA TTGTGTTATG ATGAAAAGAT AATATTAGAT 
GATATAAATA TAGAAATAGA AAAAGGGAAA ATTACAGCAT TAATTGGACC TAATGGTTGT
GGTAAATCTA CTTTAATAAA GTCTATATCT AAGATACTTA CTCCTAAAAG TGGTGAAGTC
TTAATGGGAG ATAAAAATCT TCTTAAAATG CCACCAAAGG AATTAGCAAA GGAATTAGCT
ATGTTACCAC AAAGTAGTAG TGCTCCAGAG GATTTAACTA TTTATGATTT AGTTAAGCAG
GGGAGATATC CTTATCATAA CTTATTATCA TTTTGGAGCA AAAAAGATGA GGAAATAGTA
ATGGAATCTA TTAGAAAAAT GGGACTAATA GAAGAAAAAG ATAGGACTTT AGAAAATCTT
TCTGGTGGAC AAAGACAAAG AGCATGGATT GCCTTATCTT TATGTCAAGA TACAGAAGTT
ATACTTTTAG ATGAACCTAC AAATCATTTA GATATAAAGT ATCAGCTAGA GATTTTAAAT
ATTTTAAAAG AGCTTAATAG AAAAGAAAAT AGAACTATAG TAATGGTAAT TCATGATATA
AATCATGCTT TAAGATATGC TGATAATATA ATAGCTTTAA AGGATGGAAA TATATTTGCC
CAAGGTAGCA AAGATAAAAT TATAAATGAA GATCTTATTA AAAATGTTTT TGATATTAAA
TGTAGAATTA TAGATTCACC AATTGATAAT GGTAAGATGT GCGTAACTTA TATATAA
 
Protein sequence
MKMIKTNNLK LCYDEKIILD DINIEIEKGK ITALIGPNGC GKSTLIKSIS KILTPKSGEV 
LMGDKNLLKM PPKELAKELA MLPQSSSAPE DLTIYDLVKQ GRYPYHNLLS FWSKKDEEIV
MESIRKMGLI EEKDRTLENL SGGQRQRAWI ALSLCQDTEV ILLDEPTNHL DIKYQLEILN
ILKELNRKEN RTIVMVIHDI NHALRYADNI IALKDGNIFA QGSKDKIINE DLIKNVFDIK
CRIIDSPIDN GKMCVTYI