Gene CPR_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0609 
Symbol 
ID4206609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp728215 
End bp728910 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content27% 
IMG OID642565169 
ProductDNA-binding response regulator 
Protein accessionYP_697936 
Protein GI110801877 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.82114e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA AAAAAGTCCT AATAGTAGAT GATGAGGAAC ATATTAGAGA ACTTATAAAA 
TTTAACTTAA AAAAAGAGGG ATATGATATA GAGGTTGCTG TTAATGGAAC TGAAGCTCTA
AATATTATAA GAGAAATTAA GTTTGATTTA ATACTTTTAG ATTTAATGCT TCCAGAAATA
GATGGTTTAG AAGTATGCAA AGAAATTAGA AGAAATGAAG AAACTTCAGA TATTCCAGTA
ATGATGATTA CAGCAAAGGG GGAAGAGTTT GATAAAGTAT TAGGCTTAGA ACTTGGAGCA
GATGATTATA TAACAAAGCC ATTTTCAATA AGAGAACTTA TGGCTAGAGT AAAGGCTTTA
CTTAGAAGAA GTAATTTTAA AAAAGAAGAA AATATAATTA AATTTGGTGA TGTAGTAGTT
AATTTTAAAA CAAGAGAAGT AATAAAAGGA ACTCAAAATG TAGAATTAAC ATTAAAGGAG
TTTGAATTAT TAAAGCTTCT TATAAAGAAT AAGGACAATA TATTAACTAG AGAGCTTTTG
CTTGATAAAA TTTGGGGATA TGAATACATA GGGGAAACAA GAACAGTAGA TGTTCATATT
AGACATTTAC GTAAAAAGAT TGAAAGTGAT GATAAAAATC CTCAATATAT TCAAACTATA
AGAGGAGTTG GGTATAAGTT TACAAGCAAT GAATAA
 
Protein sequence
MTNKKVLIVD DEEHIRELIK FNLKKEGYDI EVAVNGTEAL NIIREIKFDL ILLDLMLPEI 
DGLEVCKEIR RNEETSDIPV MMITAKGEEF DKVLGLELGA DDYITKPFSI RELMARVKAL
LRRSNFKKEE NIIKFGDVVV NFKTREVIKG TQNVELTLKE FELLKLLIKN KDNILTRELL
LDKIWGYEYI GETRTVDVHI RHLRKKIESD DKNPQYIQTI RGVGYKFTSN E