| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0589 |
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| Symbol | |
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| ID | 4204455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 702289 |
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| End bp | 703089 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565149 |
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| Product | LicD family protein |
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| Protein accession | YP_697916 |
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| Protein GI | 110801529 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3475] LPS biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000965792 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTATA GAGAATGTTC ATTACAAGAA GCACAACTAA GAATGCTTGA AATGCTTTGT
GAAATAGATA GAATATGCAA AAAATATGAT ATAAAATACT GGCTTGATGC AGGAACTTTA
TTAGGAGCTA TAAGACATAA GGGGTTTATA CCATGGGATG ATGATATAGA TATAGGAATG
ATTAGGGAAG ATTATAGAAA ATTTAAGTCA ATTGTTAAGG GGGAGTTAGA TCAAAATTAT
TTTTGTCAAA GTCCTTTAAC AGATAGTTAT TCAGAATCAC CTTGGATAAA AATAAGAGAT
AATAATAGTC GTATAGGAGA AGAAAAAAGA GAAAAAGGAC ATTCGGGTTT ATTTATAGAT
ATATTACCTT ATGATGATTA TAATGATTAT AATAATGCTA AAAAGAAGCC AATATACAAT
ATAATAAACT TAAAATGGAA AAGTGAATTA CCCTATAAGA AGGGGATTAA AAATATACCA
AGAAATATAA GTTTATTTTC TTTAAAATTA ATATATAAAA TATCACCATA TAAAATGTTT
ATAAAGAAAA CATTCTATAT GGCAGATAAA GCTAAAAATA TGAATAGTGA GTATATAGAT
TATGGAATTG AAGGTCCTTG GAATATGAGA CTGAGAAAAT CAGATGTATT TCCATTAAAA
TCAACAGAAT TTGCTGGATA TAAATTTATG ATTCCTAATA AACATGAAAA TGTATTAAGA
TGTTTGTATG GTGAATGGAA TGTCTTACCT CCGAAAGAGA AACGTATACC TACACATTCT
GAAAAAATTT ATATTAGATA G
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| Protein sequence | MDYRECSLQE AQLRMLEMLC EIDRICKKYD IKYWLDAGTL LGAIRHKGFI PWDDDIDIGM
IREDYRKFKS IVKGELDQNY FCQSPLTDSY SESPWIKIRD NNSRIGEEKR EKGHSGLFID
ILPYDDYNDY NNAKKKPIYN IINLKWKSEL PYKKGIKNIP RNISLFSLKL IYKISPYKMF
IKKTFYMADK AKNMNSEYID YGIEGPWNMR LRKSDVFPLK STEFAGYKFM IPNKHENVLR
CLYGEWNVLP PKEKRIPTHS EKIYIR
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