Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0585 |
Symbol | tagA |
ID | 4204652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 697807 |
End bp | 698529 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642565145 |
Product | N-acetyl-mannosamine transferase |
Protein accession | YP_697912 |
Protein GI | 110802343 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1922] Teichoic acid biosynthesis proteins |
TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000442677 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAAA TTTTTAATCT AGATTTTTAT GATGAGAATT TAGAAAATTT AAAAATAGAG TTAGAAAAGG ATATAGATGA AAATAAAAAG GTAAGAGTAT ATACACCCAA TGTAGATCAC ATAATTAATA TAAAATCTAA TGAGAATGTT TTTTTAAAAT ATAGTAAGGC TGAATATATA ATTGCTGACG GATGGCCAGT AGTAGCTACG GCAAAGGTTA AAAAAACACC AATACACAAA ATAACAGGTG TTGATTTAAT GGATGAACTA TTAAAGTTAG CTGATAAAAA GAGTTTAAAT ATATTCTTTT TAGGTGCTAC CGACTATACC TTAAAAAAAT TAAAATTCAA TATAGAAAGA GATTTTAATA ATATTAATTT GATAAATTAT AATAATGGTT ATTTTAGTGA AAAAGAAAGT GAAAGAATAG TAAAAAAAAT AAATGATACA AATTCTAATA TACTTTTCGT TGGTATGGGC TCTCCTAAAC AGGAAATTTG GATTACAGAA AATATAGAAA AACTTAATGT AAACATTACA ATAGCTGTTG GAGGAGCATT AAAAATATAT TCAGAAGAAA TTGAAAGAGC CCCTAAATTT GTTCAGCAAA TAGGTATGGA ATGGTTTTAT AGATTTATGA AAGAGCCCAA AAGACTATTT TCTAGATATT TCGTAAAGTA TCCTAAATTT ATAAAACATT TTATTGATGA AATTAAGGAG TAA
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Protein sequence | MVKIFNLDFY DENLENLKIE LEKDIDENKK VRVYTPNVDH IINIKSNENV FLKYSKAEYI IADGWPVVAT AKVKKTPIHK ITGVDLMDEL LKLADKKSLN IFFLGATDYT LKKLKFNIER DFNNINLINY NNGYFSEKES ERIVKKINDT NSNILFVGMG SPKQEIWITE NIEKLNVNIT IAVGGALKIY SEEIERAPKF VQQIGMEWFY RFMKEPKRLF SRYFVKYPKF IKHFIDEIKE
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