Gene CPR_0543 details

Gene Information

• Locus tag: CPR_0543
• ID: 4206389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 643852
• End bp: 644547
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 642565100
• Product: DedA family protein
• Protein accession: YP_697871
• Protein GI: 110803554
• COG category: [S] Function unknown
• COG ID: [COG0398] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAGAAAA TAGTTAAACC TTGGGTTGCT ACCTTAATTA TTTTAATAGT AGCTTTTTTG 
GTGTATTTTT TTGTTCCAAC TGCTAATAGT AAAATAAATC AGATGATATT TTACTTAAGT 
AGTATGAATT TAGATATGAT AAAGGAATAT ATATTATCTT TTGGAATATG GGCACCTATA 
ACATCATTTT TATTAATGGT ACTTCAATCT GTAATAGCAC CAATACCAGC TTTTTTAATA 
ACCTTAAGTA ATGCAGCTAT ATTTGGATGG GTTAAGGGTG CTATATTATC ATGGAGTAGT 
GCCATGGCTG GGGCAGCACT ATGTTTTTAT ATAGCAAGAG GCTTAGGAAG AGATGCAGTT 
GAAAAATTAA CTAGTAAATT TGCCTTAAAG GATATAGATG GTTTCTTTGA AAAGTATGGT 
AAACATACTA TACTTATAGC AAGATTACTA CCTTTTATAT CTTTTGACTT AGTTAGTTAT 
GCTGCAGGAC TTACATCAAT GAATTTTTGG TCATTTTTCA TTGCTACAGG TATTGGACAA 
TTACCTGCCA CAATAGTATA TTCTTATGTT GGAGGTATGC TTACTGGGGG AGCACAATTA 
CTTATGAGTG GACTTTTAAT TTTATTTGCT TTAAGTATAG CAATATATGT AGGGAAAAAA 
GTTTGGAATG AGAAAAGAGG TAAAAATGAC AAATAA 

 

Protein sequence

MKKIVKPWVA TLIILIVAFL VYFFVPTANS KINQMIFYLS SMNLDMIKEY ILSFGIWAPI 
TSFLLMVLQS VIAPIPAFLI TLSNAAIFGW VKGAILSWSS AMAGAALCFY IARGLGRDAV 
EKLTSKFALK DIDGFFEKYG KHTILIARLL PFISFDLVSY AAGLTSMNFW SFFIATGIGQ 
LPATIVYSYV GGMLTGGAQL LMSGLLILFA LSIAIYVGKK VWNEKRGKND K